Gene detail

Detailed information of BRAKERRLHP00000046919.1 in Dendrophyllia cribrosa

Genomic Location: not available for this species
NR annotation: MCL4125782.1, hypothetical protein [Idotea baltica]
Species Dendrophyllia cribrosa · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O86422	UDP-glucose 6-dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=udg PE=3 SV=2
O54068	UDP-glucose 6-dehydrogenase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=rkpK PE=1 SV=2
P96718	UDP-glucose 6-dehydrogenase YwqF OS=Bacillus subtilis (strain 168) OX=224308 GN=ywqF PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004194 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03721 all species →	UDPG_MGDP_dh_N	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	Domain	Interproscan
PF03720 all species →	UDPG_MGDP_dh_C	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain	Domain	Interproscan
PF00984 all species →	UDPG_MGDP_dh	UDP-glucose/GDP-mannose dehydrogenase family, central domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014027 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, C-terminal	Interproscan
IPR001732 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, N-terminal	Interproscan
IPR008927 all species →	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR017476 all species →	Family	UDP-glucose/GDP-mannose dehydrogenase	Interproscan
IPR036220 all species →	Homologous_superfamily	UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR028357 all species →	Family	UDP-glucose 6-dehydrogenase, bacterial type	Interproscan
IPR014026 all species →	Domain	UDP-glucose/GDP-mannose dehydrogenase, dimerisation	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43750 all species →	UDP-GLUCOSE 6-DEHYDROGENASE TUAD	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan
GO:0000271 all species →	Biological Process	polysaccharide biosynthetic process	Interproscan
GO:0003979 all species →	Molecular Function	UDP-glucose 6-dehydrogenase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERRLHP00000046919.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.