Gene detail

Detailed information of BRAKERTYJP00000001158.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000001158

ATGTTTTTGCGGAGATTGTCAAGAAGGAAATTTCGAAAGAGTAACAGTTTGATTGCATGTCGTAGCAATGGAAGAGAAAAGGTTGAACCAGCTTGTCCTTTGGCCCCTAACAGTGGTGTTTTAGatgAAGAGGAAGATTCTAACAATGACCAAGCTGAGAGCATTAAGCCACTGAATACAAAGCTTGATGACCTTCAAACTTGCAATGATCTTGTAGGAAAACATGGCTCTGCCTTGCAGCGTGCGATTGTTGAACTTCAGGAAGTGGAAGATAATCCTACTCTGTTCACTAAGCTCAAGTTTGTGAATGAGAAGGCCACTCTTTTTCGGATAACAGCGAATGCCATGATAAGTGCTTGTGCAGAATTCTTGGAACTTGCGCAGACACAAGAGAAAAGGTGGCAAAAAACTCTACAGTTAGAGCGTCAACGACGAGTCACCCTTGAAGAGACAGTAGAAGCTTTAGCTAAACAACACAATACGCTTGAAAGGGCATGTCGGAAAAGCACAGGAGCAAACTTGGCTGACATGCCAGGGGGTGAACTTAGTCGGGACAGTGAcgaggaagaagaagaggaagaagtaGAGGAAGAGGATGATGAAAATGCCGAGTTCTTTGATGCTATAGCAGAGCATCCTGAGGGCTTTACTATTCCAGTTAGCAAGAGCCACGAGAGTTTACAAAGTACAAGCTCTGAGACCAGTATGGAGTTGGAAAATGCCAGTAGTTCAGGCAATAGCAAACAGGAGGTAGTTAGGAATGATGGTTCTGCTAAAACAGCTGATGAAGTGGTGTTCACAACAGGCGATTCTCAAACATCCACTGGTGATGAACCAAATGCAGGTTTTCATAACAAGATTGTCACAGCTCCTTTCACGGTGAAAGGCTCATTTGGAGTGGCTGTTACTCAATCTACAGACCAGCTTGTGGCAAAGCATTACAGAAAGAGAATACCCGACAAACCAGACATTAGTATTAATCTATGGAGCATCATGAAGAACTGTATAGGAAAAGAATTATCTAAAATTCCCATGCCTGTTAATTTTAATGAGCCCATTTCTATGCTCCAAAGACTGACAGAAGAGTTAGAATATGCACATCTTTTAGACAAGGCAGCAGCCTGCGAGTCCTCCACAGAGCAAATGTGCTATGTTGCAGCATTTACAACCTCTTCCTACTCTACAACTGCCGCAAGGACAGGAAAGCCATTCAACCCCTTGCTTGGTGAAACATTTGAATTTGACAGAACAGAAGATTTTGGATGGCGTTCACTTGCTGAGCAGGTGAGCCATCACCCACCTGCATCAGCCATTCATGTTGAGCATAAGGACTGGACCTTCTGGCAGGAATTCGGCCTCACCAGCAAGTTCCGTGGTAAATATCTCCAGGTCATACCACATGGTACGGCACATCTCAAGTTCACCAAGTCTGGTTATCATTACACATGGAAGAAAGTCACGACTACAGTTCACAATATCATTGTTGGAAAGCTTTGGATTGATCAGtcaGGGGAGATGGACATTGAAAATCACACCACAAAAGATGTTTGCCAAATCAAATATGATGCTTACAATTATTTTGGAAGAGAGACACCTAGAAAGGTGACAGGAGTTATCACAGACCATCACAAGGTTGTTAGGTATGTGATCTCTGGCACATGGGATAACAAGATGGATGGAGCTAAAGTTGTGTACACAAGGTCTCCTTCTTCTGCTGTGAAGCAGCCTGCCTCCACCCCCCACAAGAGCCAGGCCCAGACTCTACCTCCAGTCACGTTGTGGAAGAAAAATCCAGCTCTGCCTGGCTGCGagaaaatgtattattttacagAGTTCGCACTGGCTCTTAATCAACCAGATGATATTGTGGCACCCACTGACTCTAGGAGAAGACCTGACCAGCGACTTATGGAAAACTGTAAATGGGATGAAGCTaatcaagaaaaacaaaaactggaGGAAATGCAAAGAACAAGAAGACGGAAACGTGAATTTGAAGCCTCTGAAGCCCAAACAGAAGGGAAAGTTTATGAAGGATACAAGCCAGCgtggtttgagaatatcatagatgaGCTGACTGATTCTTCTTTACATGTATACAAAGGTGGCTACTGGGAAGCTAAAGAAAGAAAGGACTGGAGCTTGTGTCCAGAGATTTATAGTTAG

Transcript

BRAKERTYJT00000001158

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01237 all species →	Oxysterol_BP	Oxysterol-binding protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000648 all species →	Family	Oxysterol-binding protein	Interproscan
IPR018494 all species →	Conserved_site	Oxysterol-binding protein, conserved site	Interproscan
IPR037239 all species →	Homologous_superfamily	Oxysterol-binding protein superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10972 all species →	OXYSTEROL-BINDING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008289 all species →	Molecular Function	lipid binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0015248 all species →	Molecular Function	obsolete sterol transporter activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0032934 all species →	Molecular Function	sterol binding	Interproscan
GO:0043231 all species →	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0097038 all species →	Cellular Component	perinuclear endoplasmic reticulum	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20456	OSBP; oxysterol-binding protein 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.