Detailed information of BRAKERTYJP00000001434.1 in Cladopsammia gracilis

Genomic Location: JAJGOT010000003.1:2004411...2010973
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001389 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00703
all species →
Glyco_hydro_2Glycosyl hydrolases family 2DomainInterproscan
PF02837
all species →
Glyco_hydro_2_NGlycosyl hydrolases family 2, sugar binding domainDomainInterproscan
PF02836
all species →
Glyco_hydro_2_CGlycosyl hydrolases family 2, TIM barrel domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006102
all species →
DomainGlycoside hydrolase, family 2, immunoglobulin-like beta-sandwichInterproscan
IPR006104
all species →
DomainGlycosyl hydrolases family 2, sugar binding domainInterproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR036156
all species →
Homologous_superfamilyBeta-Galactosidase/glucuronidase domain superfamilyInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR006103
all species →
DomainGlycoside hydrolase family 2, catalytic domainInterproscan
IPR023230
all species →
Conserved_siteGlycoside hydrolase, family 2, conserved siteInterproscan
IPR017853
all species →
Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR006101
all species →
FamilyGlycoside hydrolase, family 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10066
all species →
BETA-GLUCURONIDASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004566
all species →
Molecular Functionbeta-glucuronidase activityInterproscan
GO:0019391
all species →
Biological Processobsolete glucuronoside catabolic processInterproscan
GO:0030246
all species →
Molecular Functioncarbohydrate bindingInterproscan
GO:0004553
all species →
Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005975
all species →
Biological Processcarbohydrate metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERTYJP00000001434.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP