Gene detail

Detailed information of BRAKERTYJP00000001464.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000001464

ATGTTCGAATTAGGAATTTTAAAGGATTTTCTACCTCCAAGCAAGTTCCCTAAGTTTGGTTATGTGGTGATCATTCTTTATCTTCTCAGTGAAGTTTTCTTCGTAGGATTCGCAGCAAGCTTGAGATCAAGAGAGCAGGaacaatttcactgcaactttCTTCGCGACACCGTGTCTGACCAGAATTATCTTCAGAAACGATGTTACAAGAAGTATGACAACGAGTATTGTTATCTCCTGCCACTCTGGGGATTTGTGTTATTGAAATTTATTTCGGTGTTGACTGTGTGCCTGATTTATTCCTGTTGTGTGCCTTCAGGATTTGTCCGAATAACACCTTACGTGAGGTCAGATGTAGAAAGACCACAGTTCAGGCAAAGAAGCGAATCTCATCGAATAGACCGTTGTTATTTCCACCATTTAGTGGCACGACTCGGACTAACGACTTTGTTTGTAGTGTTACAAACATCTGTTTTCTTCCCCTTTAAATTTCCTACCGAATACTCCTGTGTTCCGCCAACAGAAACAGAACAAGCATGGAATGTCACAAATTCCAAGTCTTCCAACACCACGATCACTGCGAACACTGTCCTCAATTGTCAAAATTCACTTGCTAAGGACAAAACCACTCTGTCCGCATTCATTTGGATGTTAAacattatttttgtgtttctcgTGTTTGGAGAAATTATTTTCCTGGTATTCCGAGCATCACAGAGTAGTAACTTTACCGATGACGCTGAATTATGTTCAAAGTGTTTGTTCAACCGAAGCTCGACAAATAGCTTCAGCAATCGTAGGAAAAAACTGATTTTGCAACAAACCGAGAACGTTTTACTGACTACCTGTGAAGAAAAAAAGTTCACTGATGACATATTTGTAGATCCTGTGGTACACTTGAAAAAAGTAAACGGTGAGTTTATTGAAGTAAACAGTTACGAAGAGTTATACGCTCCAAAAGTTCTTGTTGTTGGTCCTCCGGGAGCTGGAAAGTCCGTTCTGTGTCATAAATTGTTGCGTGATTGGAGTAAACAGGAAACTTCGCTTCACAGTTTCAACTTCGCGTTCTTGTTTGAATTCAGCTGGTTTAATTCTAAGTCAACTGACACCATGTCTCTCATGGAATTGTTGAATCGAGGAGTACGTTCGGAGGATGTCGTTGAAAacggttttcaacagctgttaGATAACCCTGAGGAAATACTTCTTATATTTGATGGCTTAGATGAATTCAAGAATCTCAAAAGTTGCAACGATGGTAAAAAAATAGAATTAGAAGATAGTTTAACACAGAAAATTCCAGTGTCGACACTCTACCTTAAATTGCTGCAAAACAAGCTGCTTCCCGGTGCGACAGTGTTAACAACGAGTAGATACAATGTGATAAAAAGTGATGTGGCCTCGTGTTTTGACAAGATTTTCGAAATCAAGGACTTTACCGAAGCGAAAGTACACAAATACGTGGACAACTATTGTAAACAAGATGAAGACATCACAATAGTAACAAAGATAAAAGAACACATTAGCGCCACTTCATATTTGCTGTCGTTGTGCTATATTCCAGTGTATTGCCACATAGTCTGTGACCTACTGAAGAATTTATTAATCAATGAAGGAAGCTCAGATGGCGTCAGGCAAACAGTCGTTTACCAAAAAGCCTTGAGATTTTTTATCTTTAAGCATCACCCCTATTATCGAGACAAGCCGTTTCCAGAAAATCATGGACGCTTTTCAGATTCAGTTGAAGAGACTTTGACCAAACTCGGGTTATTAGCGAGAAGAGGAATATTTAAAGACCAAAGGATGTTCTGCTCAGAAGAAGTGGTGGGTGCAATTAAAAATTGCGGTTTGCTGAAAATAACAACAGATGAAAATGGCAAACAATATTTCAGCTTCATTCATCCAACATTCCAAGATTTTCTTGCTGCCAGAAGAATCGTGAGGATGAATCCTGATACACTCAAAAGGAAGATCATCCACGTTTTAAAAGTTAAAGACACAGACTGGTTCTTGGTTTTACAGTTCGTCATGGGACTGCTTCATGGTCAACAACATGACGCAGTCAGTGCGTTTGTCAACTGTCTTCATGATTCGTTGTTGTCAAGTCCAACCAACGGAATTATGGCTTTATTCACGATGAAGTGTTTGTACGAGTATAACAACGAAGCTGTAGTGGAAGACCTTGCTTTACGGCTGCAGCAGAACAGCGGCTTTAACAAGGCAATAAATTTGCAAAAATGCCAAGTCACATCTGCTGACTGCAAGGCAATagtcttttttttaaaacactttGATTCGCTAGAATCAGTTGACATTGGAATTCCTTTTCCAAATGTAAAAGATATTCAGGTGGAACTCAAGCGGAAGTACAACACTCAGTACGCAGCCAGTAGAGGACTTTTAACAGGCAGTGAGTGGTATGAGATCCAAGCCTACAGAGCACTAAACCAGGCCTTAGGAAGGTGCATTCGTCACAAACAAGACTGGGGAGCTATACTTCTCATAGACGAGCGGTTCAACAAGTCTCCGAAGTACACTAACGGAATATCCAAATGGGTGCGAAAAAGAATTGCCAAGTTCACAGACTTTGCCATGGCCATGTCCTCCCTGAAAGAATTCGCATCGGCCCGAAAATTAGAGCCTTGCCCTTCATCCACCAGTCCCAACTCTCTTAGTCAACTGAGCAAGAGTACAGTGGAGACTCCAGCGAAGGAAGATAGCGTTCACACCGGTACAAGGCCTTTGGAGCACACTCCACTTGGTAAAACCCACTTGAACGCATTTGGTGGGTTCACACCAGGACAGAACGTTCACACTGATCAACTGAGCAGGAGTAATGGGTATACTCCAGCTAAGGAGGAGCGCTTTCACACTGATACAAAGCCTGCTGTAGAGCACACTGCACATGGCCAGGCAATTTCAAATTGTGGATTTACAACTGCATCGAGCATTAACACTGACCCGAATGGTGGGCTTACACCAGGGCAGAATATTCACACCAATATTAAACCATTTGTCACTTGCAATCGTGAAGGTAACTCCCATGTAATCCCAAATGGCGCATTCACACCAGTACAGAATGTTCACACCAAAGTGCTCAAAGCGTCCGTAGCGCACACTCCACTTGCTGACACCGAGGGAAACCCGAATGTCAGCTTTACACCTTCTCAGATGCCCAATTCAAGCTCCTCTAGTGTCACTCCTaaggttttgtttttaaacacaGATAAAAACAAAGTGCCAAGTATGGACCAAGGGATAAAGAAGAGAAAGGTTTTCAATGGAATGACATTGGTTCTTGACTACAGTCCAGTAAGTGGTTTTAGCTTAACACCAATGAAATGTAGCGAGCAAAAAACTGATGTCAAAGTGGAAAATCAAGTAGCAGACTGTGCAGCAAACAAGAACCCTGAAAGTGAGACGCTGTCGGATGAACAGCTATCGTCATCACCTGTGTTGTTTACAACGCCTCACTCGACTCCTTCAACGTCACCGGTTAAACAGGAagaaaacgtgtttaaattctcGCAAGGTGAAAACAGAACAGGTGTTAACTCGTCAAACCTGAATCTTAGTCATGACCCGAGTGGGAATAACATGGGCAAGAATTCAATTGAAACGTCAAACAAAGGTGATGGCGACATTGGAACCTCATTGGCGAAATGCGATACCATCATTGAAGAACGTTTGGCAAAAGTTGATACATTCATTGAACCTACGTTGGCAACAGACGGGGGAAATCAAAGTGGTGTTCCACCAAGAATGCTTTTTAACTCTAGAGAAACTGCGGGACAGGAGAAGCTTGTTGATGAGGCAAGGGAAGAGAAAAAGCCACGCGATCTCCTAGATGACGTAAAAGACAACATTGCTCATGAAAAGGCGACAGATCAGGAAAACAGCTTACAATCTGATGGGCTAAAGGAAGAAAGCAGTATCGATCCCAAAGTTGTAATGTCTTGTTCCAAAAGAACTGGGCTTGCCTACAAAGGAGTCAGTGACGTACCGAGCAATGTTCGGCAAGGTACAAGAAGAAGCAGCCGGCTTCGAAGATCATCAAATAGCACTGGTAACACGAAAAAGAAGCAAGAAAAGATGAAAGAGGAGAAACAAGAGGAGGATGGCGGTGAACCCATCTTGTCCTGTACCCATTGTGAAAAAAATCTTATTAAAGGTCCCATAACTTCCATGCCTTTCTCAAATCAAATACCCGACACATTGCGGGGTTCCTTGCTGCAGGCAGTGGACGAGAAAAATGTTCTCATCATCGACCGAGCAGCATGTGAGATCCTAAACTTGAGTCCTTTGATTGATCTAAAAAACGATCATACTACAGATGTTAAATTAAACAGCGTTTTTATTCCGGAAAACGACTGTTGCTACATTCCACAAGTCTGCCAAATGTGCCAGTCAGCTAACGGTGATTCCCGGATTGTGGGCCTGGAAGTTGTATCCTTCGATTCATCTTCTCAGAAGGAGCAAACTCAGTCTCTTCCATCCAAACAGGTAACGCATTCTTGTTTAGTCAATATAAATTACTAA

Transcript

BRAKERTYJT00000001464

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13307 all species →	Helicase_C_2	Helicase C-terminal domain	Domain	Interproscan
PF05729 all species →	NACHT	NACHT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007111 all species →	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR050637 all species →	Family	NLRP family, innate immunity and inflammation regulators	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR038359 all species →	Homologous_superfamily	Connexin, N-terminal domain superfamily	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR006555 all species →	Domain	ATP-dependent helicase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45690 all species →	NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0004386 all species →	Molecular Function	helicase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006139 all species →	Biological Process	nucleobase-containing compound metabolic process	Interproscan
GO:0016818 all species →	Molecular Function	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERTYJP00000001464.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.