Gene detail

Detailed information of BRAKERTYJP00000003622.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000003622

atggcggctttCGAGTTCAAGGGAAGGAAGCAGAAAGAATCTTCATCGTCTAGGGTGCTTTTGTCAGTCATAACTACGCTACTAAGTAGTGACAATGTGGAAAGAAGAGAAATTGAAAAGGAAAGGCTGCAACATGAACTTAGAGAAAGTGATGACAGACTGAACAGACAAGTAGAAAaacaCCAAGAACACTTGAAGTCAAGCATTCAAACATTTACTGGAATCTCTACAAGAATTGCAGCATCCCTTGAGAAAACAAAGGCTTTGAGAGAAAATCTTTTAGCATGCAAATCATTACTGCACTGCAAGAGAGAAGAGCTGAAGAAGTATTGGATGGATGGATTGGAGTATAATGAAGTCCTTAATCTCTTGGATAGAATAGACCAGGTGAAGAATGTCCCAGAACAGATtgaaaaatataagaaaaagaaatattaccttcATGCCACAGAGCTTCTTGTCTCCACAGTGTCATTGCTTGAAGGAAGCTTGTCTGGTGTTGAGGCACTGCGTCATCTCAGACTTGATTTGCAAGCAAGGAAGAAGGTGGAACATGAGTTACTGATAAAGAATCTCAACACTCATCTGTACCTGAAGTCAGAAAAGAGCAGAGCAAAGAGAACCAAACTGGCAGCATATATGGCTGATGATGCTGCATTAAGAGTCAGAGAGTTGTCTTCCAGTGTTACTAGTGGAGATTTCAAGAAGTCCCACTCAAGAACTGCTTCAAGAACTCTGTTGATGGAACCAACATCTTCAGTCACTGTAACCTCTTCAACTGAGATCACAGAAGACCTGAATGCTGACCCAGAGGACGACAGTGATCACTTTATGATTGTAATCATAGAATCACTGTCACTTCTTGGGAAAATTCCAGAGACCATTGAGGCAATAAAGAAAAGAATGAAGATAGAGATGTCCTTAATTATCCACAGAGCTACCACCCTTGTTGCcaaaaagATTGGGCAGCCTGGAGAAATAATTCTTCAGCAGAACCAGCCTCATTATCTGTTTGAGCTGTTAGAAGTGGTGTTCGACTTGTTTAGGGGTGTGGCCCATGCACATGAGACTGTGCTTTCTGCAGTCCACAGAATCATTACAGCACCAGATAACCAGGTGGACTTAGGAGACACAGATATTTACACAATAGATGTTGTTTGGTCTGAGATCCAGTTTGCAATCCAGGTTTTACTAGGTGATTACTTGGATGTTCAAAACACTGCCACTCAACAAGGCCCAATGACATTTTCTGAGTCCACCAGTGATGTAGCAGAATTCTTTACACTAAGAAGAAGAGGACCACTAAAGTCAGATGAACGGACCCCCCTGTATCGCTTTGAAGGTTCCTCATCTGCTATAAGTATGAACACATACATCAGAGAGAGACGCCAGGAGTGCATGGCTGGGACAGCGAATGAGGATGACGATGACACTTATGGTGAGCCACTTCACAACACCAAGCCACAGCTGCTGTGTAAACCAAACCCCAGGAACATTACAGTTGTGTTTATCCCACTGATGTCCTTTGTCAGTGAAATTGAATCAGCCATCAAAATGCAGGGAGAAATGAGATGCACTCTGTATGGATTTCTTACTGATTATGTAAAAGACATTTTCGTGGAAGAAATCCTGTTTGGTATCCGTGAAAAACTGAGTGAAGTTACCCAAGATCGAGAGACATTTAGAAGAACTACTGATGCTAATATTCTGAAGGTTCTGGGAGCAAGCAGGCCCCTACTGCAGAGCACAGCTACAGTGGAACAGTTAATACAGGACCTCAAGAATCTCATGCACAGCTTACCCAACTACTCTCCTCAGTTCCTCGAAATGGTTTGCAAGATGCTCACCATTTTCAAAGACAGTTGCTACGAAGCATACAAAGCTCTGCTGCGGTACAGTCCTGATGGTGTGACCAGTGTCTTCAGTGCTAACTGGACAAAAGATGAGGACATCAGTCGCTGCTTAAGaTCGCTGCCTAACTGGCCAGGCCTTCATCACCATCACACACACAGACAAAGAAAAGAGGACGAGGAACAGGATGTAGAAGCAGCACGAAAACGAAACCAGAAGGAGACTGACATATTGACAGATAATCTGGCGAAACACACTCTAAATGAAGCTGAAGTGCTGTTTGAAACACGTGACCTCAGAACACTGGCAAACCTTCAGGAGAGTATGGAATGGTTGGCAGGTCACATTCGAGGTTTTACCACAAGCCTTACAGCACAGTCCACATCTATCAGCCTTGTTACTTCTGAAACACAGGAGAGAATCAAAGCGCAAGAGATTCCTTCTGTCTCTCAAGAAATCTTACAATCTCTGTCAACGCTGGCAGAAGACTTTCAGAACATCTCTGAATCGTGTTTACTGGTTCTTCACCTGGAGATCAGATGTCACTGTTTTTACTATCTCATGAGGGCTGTACAGGAACCAAACTACGTGTGCAACTCCAACGCCATGGACCCAGATAATAATGTGAATAATCTAAACAAGAGTTTGTCATCCTTCGAGGAGATAGCGACCGCCTGCATGGGGCATTATAAATTCAGgTATCTGTTTGAAGGAGTTGGTTTCCTTGTTTCCTCCATTCTTGTTTCAAACCTCTCGGACATCAAAAGGATCAATCCAAACGGCATAAAGAAAATGTGCCGTAACATCTTTGCCATCCAGCAAAACCTGACAAACATCACAATGTCACGGGAGGGGGACCTGGATCGAGCCCGACAGTATTATGAGCTGCTTTACTCTAACCCGGATGAAATTTTGACGTCCATTGTTGAGCAAGGTGCCAAGTTTACCCAAAAGGAGTACGATGACCTTTTGACACTGCAGGCGCGCAGTCAGACGATCAAAGATAACAGTGCGCATGAGCACCGACTTAAAAGGCTCAATGAGATATTCTAG

Transcript

BRAKERTYJT00000003622

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04048 all species →	Sec8_N	Exocyst complex component Sec8 N-terminal	Repeat	Interproscan
PF20652 all species →	Sec8_C	Exocyst complex component Sec8 C-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007191 all species →	Domain	Exocyst complex component Sec8, N-terminal	Interproscan
IPR039682 all species →	Family	Exocyst complex component Sec8/EXOC4	Interproscan
IPR048630 all species →	Domain	Exocyst complex component Sec8, middle helical bundle	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14146 all species →	EXOCYST COMPLEX COMPONENT 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000145 all species →	Cellular Component	exocyst	Interproscan
GO:0006904 all species →	Biological Process	vesicle docking involved in exocytosis	Interproscan
GO:0006887 all species →	Biological Process	exocytosis	Interproscan
GO:0006893 all species →	Biological Process	Golgi to plasma membrane transport	Interproscan
GO:0007268 all species →	Biological Process	chemical synaptic transmission	Interproscan
GO:0032584 all species →	Cellular Component	growth cone membrane	Interproscan
GO:0045202 all species →	Cellular Component	synapse	Interproscan
GO:0090522 all species →	Biological Process	vesicle tethering involved in exocytosis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06111	EXOC4, SEC8; exocyst complex component 4	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.