Gene detail

Detailed information of BRAKERTYJP00000008983.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000008983

ATGGCGGATTCAAGTGCTACTGAATATAACCGTATGGAAGAAAAACGTACATTGTCGAAACCGAGTGATGTTGAACTTATTTTAGATACGAACGGTACGAAAGCTAAAGATGTCCACATCGTTAACGGCTCTGTACATTATACAGGCGAGGACCTAGCATCCAATGGCGAGGTTACTACCAGCCCTGAGAAAGTAGCACATCAAAACTCGAACGGCAAAGAGGAATTACACAAAAACGGACATCAAAATGGCGGCACGAGACCGCTTGGCGACGAGGGAACCGTGGAGCTCGCACCCGCTGAATCGTCGTGGACAGTTCAAGCCGATGGCGCTGTAAATTTGCTAACAGGATCCTCTGAAAGCACAAGTCGTGTTCCGTTGACTGTTGTGCAAAGCCTGCAGAGAGCTGTACGACTTGCATCGAGCAGAGTTGCTCTCGCGGTGAAACGAAATGGAGAGTGGGTGAAATGGACTTACCGCGAATACTATGAATCCGTGCGTGCAGCGGCCAAGTCATTCATCAAGCTTGGTCTTAAGCCATATCATGGAGTTGGAATCATAGGATTTAATTCACCAGAATGGCTTATCTCGGATTTGGCATCCATTTTTGCAGGAGGCTTTGCTGTGGGAATCTATGCCACTAATACTCCAGAGGCTTGTCACTTTGTTGCTGAAAACTGTGAGGCCAATGTCATTGTGGTTGAGAATAAACATCAACTGCATAAAATTCTCAAGATTTGGGACAGACTGCCACAGCTGAAGGCTGTTGTGCAGTACACTGGAGAAATCGAAGGAGAAAAACCACCGAATGTGTACACTtgGAACGAATTTATGGAAGTTGGGAAAGATGTTGCCGATGAAACACTCCAAGAAAGAATTGATAACTTAGCACCAAACAAATGTTGCACACTTATTTACACTTCTGGCACTACTGGTAATCCTAAAGGTGTGATGCTTTCACATGATAATGTTTTGTGGACGGCAGAATGTGCATTGCGACACGTCCGTGCTGGAGAGAAAGGTCCAGAACATAACGTCAGTTATCTTCCTCTGAGCCACATTGCAGCACAGATTTTAGACATTTTTATGCCAATCTATCTTACTGGTTCTGTGTGGTTTGCTCAGCCAGATGCTCTAAAGGGTACACTTGTCCAAACCTTGCGGGAAGTTAGGCCTACGCTGTTGTTTGGAGTCCCAAGAGTGTATGAGAAGATTATGGAGAAAATGAAAGAATTGGGACAGCGAGTCACCGGATTCAAGAGAAAGATGGCTAACTGGGCAAAAGGCGTGGCCCTTCAGGGGAACATGAACCTTGAAAAGGGACAGTCAGTTCCTTTTGGCTGGACTCTGGCAAATGGATTGGTCTTGAAGAAGatcCGAGTGGCCCTGGGACTGGACCGGTGCAGGCTTTGTTTTGTTGGTGCTGCCCCAGTTACCATGGAAACCCTACGATATTTTCAGAGCATCAATATTCCCTTGTACGAGCTGTACGGCATGAGTGAGTGTAGCGGACCAATGACAGTGTCAGTACCTGGTCACATTAAATCAGGGAGCTGTGGCATAGCCATGGATGGGTGTGAAATGAAAGTTATCAATGAGGACGAGGAGGGAAATGGAGAGTTATGTATGAAAGGACGCCATGTTTTCATGGGATACTTGAACAAcgaagagaaaacaaaagaatcactGGACAGTGAAGGATGGCTACACTCGGGAGATATTGGCAAAATTGACAAGGATGGACTATTGTATATTACCGGACGAATCAAAGAGTTGATTATCACTGCTGGCGGTGAGAATATTGCTCCAGTCCCCATCGAGGACGCCATCAAAGAAGAGCTGTCTATAATTAGCAATGTGATGGTCATTGGCGACAAGAGAAAGTTTCTTTCCTGTTTCGTAACGTTAAAGGTTATTGTTGATCCAGACACTGGAGCACCTTCAGATGATCTTACAGACATTGCCATCCAATTTTGCAAGTCTGTTGGCAGTGAGGCAAAGACTGTATCAGAAATCCTGTCAAGTAAAGATGAGAAAATAATGAAAGCGATTCAGGAGGGAGTCGACCGAGCAAATGCCAAAGCCGTGTCAAGAGCTCAAAAGGTACAGAAGTGGTTAATTTTAGAAAACGACTTCTCTATTCCTGGAGGGGAGCTGGGTCCCACTCTCAAGCTGAGGAGACCAATTGTGTCCAAGATGTTCAAAGACAAAATTGACGCCTTTTACGAGGAAGCGCAAAATTAA

Transcript

BRAKERTYJT00000008983

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00501 all species →	AMP-binding	AMP-binding enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042099 all species →	Homologous_superfamily	ANL, N-terminal domain	Interproscan
IPR000873 all species →	Domain	AMP-dependent synthetase/ligase domain	Interproscan
IPR020845 all species →	Conserved_site	AMP-binding, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43272 all species →	LONG-CHAIN-FATTY-ACID--COA LIGASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004467 all species →	Molecular Function	long-chain fatty acid-CoA ligase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15013	ACSBG; long-chain-fatty-acid--CoA ligase ACSBG	EC:6.2.1.3	Lipid biosynthesis proteins	ko01004	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.