Gene detail

Detailed information of BRAKERTYJP00000012940.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000012940

ATGGCGACTGAAGATAACAAAGGAAGCAGCTACGATGTCGTTTCCAGTTCTTTTCCTAAAGAGATCTGCTATATAGACGCGCAGATTAATAGTCTGTTTGACGTTCATCTTAACCCTGGTTTGATTTCCATAAATCTGCACTGTAATAACATTGCAGTGATAGAAAACCTTGATAGACTAAAGAACCTTAAACATCTCGATCTGTCGTCCAATCATATTACAAGAATGCAAGGACTTAGTGGTCTGAAAAGTCTTAAGACGCTTAATTTGTCCTGCAATGATTTGCAGATTGTTGAAGGACTCGAAAATATGAGGAATCTAATCAAACTTGACTTGTCCTACAATATAATCAACAATCTCTCAGGTTTGAAGAAGCTTCATGGACCTGGCTTTAGTTTACAAACCCTTTATCTCCAAGGAAACCAGCTCAGATACCTTGATCATGTGATAAACTCTCTTAGTGGGTGCAGAATGCTCAAGGAATTAACATTGTCACAGTATGGAGAAGCTAACCCTGTGTGCGAGATGTCGGGTTACAGATCCAGTGTACTTACAGCTTTGAAAATGCTTGAAGTTTTAGATGGACTTGATCGGAGTGGGAAACCAGCGGCAACTAAAAACGATATATTCAGTATTCCAGaaatggatgacTATCTAGAATACCTCAGATCAGAAAGTTCTAGTGAGAGCCCTTTGAAAGATTCTAAGTATGAAGTTATTACTCCAAGAATTGACTCAGCACTGGATAGATTCCGACAGCGAGAAACACTGTCATCAGAAACAGATGTAGGCGAGGAAAGACGAATGGAAGAGTCTCCAGTGaAGCAGCCCTCTGGTAGAGTAAGCCTGTCAGCTGATCATGAAGTTCGTTTAGAGACCCTTGAACATCAGCTCACTCGACTTATACATAACACTGAAAGAACCCATGCCACAAGTCAAGCTGGAAAAAAGACGGTCAGAGTGGAAAACAGCAACTCGGATGATTCTGAATCAAATGAACATCCTGATAAAAGAATAAAGCAAGTTCAACGATCGCCCAAAGCTAAACGAAAGCTGCAGGCCCCAGTCACCAGAAAGGGACAATCTAAAGCGCGCACCAAACCATCAGTTCATGTCACTGTTGAGTCAACAAGTTCTACATCACCGACGGATGAACAAGTTCGGAATCTGGCAATAAAAGGCAAAGCAGTGAAAGGGCGGACTGTCAGGGATCCACAAGACGATGAGACATTTCTGTCACTGATTCAAGAACTAGACTCAGAGCGCGAGCGACGGTGGAAAGCTGAGCAGGCTGCAAGGAAAATGGTGGATGCAGTGAAAGAGCTTCAGTTGAAAGAGGCCGAGGAAAAGAAACTAAGAGAAGCTTCACTGGCGGCCAGCAGTCGGTTGAAACGTGCTCTGCTCAAAGAAAAGGAAACCAAAGAATCCCTGCAGAAAACTCTAAATGAAGTGCAGGGACAAAATGTTGAGCTTAGTGAAGAAGTAAAAAGGTTAAAAGAGAGCGAAGAAGATCAACAGAGAGCTTTGCGGGCCTTGGAGCAGGCTGCGACGAAGATGGAGACGGATAAGATTAAGCAACACGCAGAGGCGGTTTCTCAACTACAACAGGAGCAGATGAAAGTTGGCGCCTTTACAAAGGAGGCAGAACTGTTAAAACACTCAGTTAAACAACTGAAAGGCCAAGTTCATCAACTGCAGGAGCTGCTTGCTAACAGAGAACAGGAACACAGGAAAGCCGTGGAAGGCCTGGTACGAGTTGATAGTCAGGAGATGCGGGTGATAGTGGATCGGGAGGTCGCTAAGCAGGAGACCGTTCATCAGCAGATCATTAGAGAATATCAAGACAAGTTAAATAAGCGAGATCTGGAATATGCTGCCCTTGAAGACGAGTTTAGAATGGGTCTTCAGATCGAGGCTAACCGATTCAGAGAGCTACAAGAAGCGtttgagcgagtgagtgacgaGAGTGCTCAACAGAAAGAAGCACTACACACtgttaaacaaaaggaaagcaAAGCCACTAATATGGTCAACGAACTCACAGCGATGGTAAAGGAGCAGCGCGGAAGAATCACTGAACTATCTCGAGGAAGACAAGAAATAGTCGGAGATTACAAAgaaaGAATCCAAAGTTTAGAGAAACAGCAGGGCGAAGCCAATAAACAGCTGTCAAAACTAGAAGTACTAGAACAGGACAAAGCCAAGTTATCGGCCCAGATTCGAGCTCAAGGATCGGTGATTGAAGGTTTGAGAACGGAGAGAAAACTATGGAGCGAAGAGCTCGCACAACAAGGAGCATCACTGGCCCAGGATCGCGGGCGAATGGAAGCCCGCATTGAAGCACTAACGGCCGAGGTCAGCGGACTCAAGAAAGAAAGCCAGAGTGCTAATGAAACAATAGCTATCAAGTCGAAAGTAATAGAGGACCAGACAGACACCATTAGAAAACTTAAACAGAAACTCGCAGATCAAGACTCCGACTTGCGCCAGAAAACAGAAGACCGTAAGACACGTGAACGAAACCTTGAACAGCAGTTAGCAACTGAGTCTGCCGCCAGTCAGGAGCTGCAGGAGCAAGTGGACGCACTTATAGATCGCAAAGAATCGCTCAAACAAGAACTGAACAAGACACAAGAAGAACTACAAACTAGCAAAGAAAACCACAGGACACTGAAGATTAAATGGCAGGAGAAGAGCGAACTCATAAGCAGGCTGGAGAAGGAAGTTGTCGAAATGCGAAACAGCtttaaagaaaaagagaaaacgtTGACTGAAGAAAGAGACAAAGCCATTAAGGCAGCCGAttcCGCTGTAGAAAGATTAAAAGTGTGTGACGATGCCTTCCGCAAACAACTGGAACAGGAAAGACAGGCTCACGAACAGCAAATTCAAACATTGAACAGTGAGAGGCAGCAAGAGATGGAACAGGCTAACAACAGGGTTTTGGAAGTAGAGGACGAAATGCGCATTCTTTTACAAGAGAATGCGCTGACCAAGAAGACTTTAGAACAACGGCTCAAGAAACTCACTTCGGCTTTCACAGAAATTCAACACGACTTAGCGGGGACTTGA

Transcript

BRAKERTYJT00000012940

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR050576 all species →	Family	Ciliary and flagellar integrity-associated protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45973 all species →	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16475	LRRCC1, CLERC; leucine-rich repeat and coiled-coil domain-containing protein 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.