Gene detail

Detailed information of BRAKERTYJP00000018810.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00679 all species →	EFG_C	Elongation factor G C-terminus	Domain	Interproscan
PF03764 all species →	EFG_IV	Elongation factor G, domain IV	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000640 all species →	Domain	Elongation factor EFG, domain V-like	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR035647 all species →	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR035655 all species →	Domain	116kDa U5 small nuclear ribonucleoprotein component, C-terminal	Interproscan
IPR005517 all species →	Domain	Translation elongation factor EFG/EF2, domain IV	Interproscan
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42908 all species →	TRANSLATION ELONGATION FACTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0000398 all species →	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0030623 all species →	Molecular Function	U5 snRNA binding	Interproscan
GO:0046540 all species →	Cellular Component	U4/U6 x U5 tri-snRNP complex	Interproscan
GO:0071007 all species →	Cellular Component	U2-type catalytic step 2 spliceosome	Interproscan
GO:1990904 all species →	Cellular Component	ribonucleoprotein complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERTYJP00000018810.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.