Gene detail

Detailed information of BRAKERTYJP00000022742.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000022742

ATGAATAAGGATCGTTCGCATTTTGAACAAGACCTTATAACTGACTACAGATGTCATAACTGTTTTACTAAGACATGCTTCTTTTTGGACCAATCTTTCACAGATAAGACCGACGACGACCTTCTCCCTTATCTGAACGCGCTTCAGTTCCGCAATGGTCCTTCGTTTGTGTGCGCGAATCAAAGTTTTGGATGGCAGCAGTTTTGCATACTATATTCCGAACCTGAGAATATCTCCACGATACGGTACGGCTGGGATACACTGGGCCTGAGAAATTACTTGTTTCAGAACCCGGGAGATCCAAAGAAGCAGCGGTCACCACCGACAGGCATGCGTAGTGCTGTCCCCTTAGGCGGTCTTGGCACGGGATCGTTTGAGATGCGGGCGGATGGTTCTATCCACGAGTGGACTATTGAAAACCAGACTCCCGCAGGCTCTGCCAAACTTAACTACGCAGCTCTGGAACTGGCTGTGTTTGGTGTTCGTGTGAAAACTGGAACCTCAAGCTCAGCAGCACTGCTGCGCACCCACCCTCCCACGGGATACCCAGGTGTTCATTCAATGGGATATTCTGGCTCATACCCAGTTTCCAAATTTACCATTGAAGAACAACGGTTTGGTGACGTCATACTAGACCTTTTCGCCTTCTCAGCCTTGAAACCACGTGATTCCAAAACATCTACCACTCCTGCTATTGCTTTTACGTTACGCATCAAAAACCCAACCAGAAAATCTGCTCAAGTTTCATTCATGTTTAATCTACCATTGGGCATTCAGCCCGATACAGTAAGACTTGGGAAGCCAGACAAAAGCTTTAAGGATGCGAGTGTCAGTCAGTGTGCAAGAGCCTGTATAGATGACAAGAAATGCATGTCATGGCAAATGGAAACTCAAAATAAAACATGTCAGTTATTCTACCAAGTCCCCCCTCACGCCTGGCATCCGGGTATTACTTCCGGTCAAAAGAGCACGTGGACAGCTCATGATTCGATGTTGACGCTCAACAGGCCTGGAAACTATCCTCAAAGCGGCAACACCACTATTGTAGCAGACAAGAAATCGAGTCCTTCCTTTATGATAAGCGACAGTTTTGAACAAATTTGGAAGCAGTTTGAGAAACATGGATATCTGATGTCGTCGGCCAAATCACTGATTGGAAGTGGTTTTCATGGAGCTGCAGCTATCAATGTTACCGTGGGGCCTGGGGAAGAAAAAACACTCACAATGGTTTTGGGCTGGTTCTATCCTAACCGTGATTTCACTGCGGAGATTGTCGGTAATTATTACAGTAACCTCTTCAAATCCAGCGAGGATGCAGCGTTGTTATTAACACGAAACCTGTCCTCAGTTTTGGAAACCATTTCTGCGTGGCACGCTTCAATGATACTCGACAACAAAACTGACTCGATCCAGACCCTCCCGGTGTGGTTACAGGATGTCTTGGTGAACGGATTAAGTTTCTGGCGCAGTGGGCTTTACCTTCGTGACGGCAGATGGCGCCAATTCGAGTCTCTAGACTGCATTGATGTAGATTCGGTCCATAATGACTTTCAGCGCGAAATTCCGTACGTCTTGTTTTACCCTGACTTGGTTGAGAATGTGATGCGAGCCTGGGCCAAGTACCAGAGTAATGACGGCCACATTGTGGAAACACTAGCTGCTGGTTGCTATTCCCCTACAAGAAAAATTGACAGTGGGCCGCCAAATCAGCGGATAATGGGTGACGTCACGACTGTCTTCATAACAGAAACTTACCACATTTACCTGTGGACCAATAACAGCGTCTTCTTAAAGGACATGTGGCCGCACGTGGTGAAAGCGGTTGATTGGATGATTGATGGTGGCACGAATGGAACTGGTTTGCCTTTCAGACTGCAGTGCACGTATGATCAGCTTTTCCTCAACAAATACGATCACAACACCTTTAACAGTTTCATGTATGTCCTGGCTCTGCGCGCGGCAGAGGAGCTGTGTAATATTATGGACGACTCGGATTTATTAAAGAAAGTTACGACTGCACTGGAAATCGCGAACAACCGCATTTTAGAAGAGCTGTGGAGCGAAGAAGATGGGTACTATCACGCTTGGTGGGACAAACAGCAAGGTTCGCCATCGTGGCTCATGAGTGATTCCTTGTATGCCCAGGTGTGGGCCTACACTCTGGGGCTAGGACACCTGGACGATCCAGGCAGGTTAGGATCCCATTTGATGAAGGAGCTTGAAATCAACGATACCCCATATGGTCTGCGAGTGATGGCTACTGACCATCCAACTAACAAGAGCGTGGGCTCATGTCCCAAGGATATCAACCCCACCAAGTTAAACCAGCTGGTGGCGCTACACGAGTCAGTCTGGATGGGTGCGAGTCCTGACTGGACAACTTTGCAGCTTCATTTGGGTTTAGATCCTCAAAAGGCCTTACAACAAGCAGAGAAAGCCATCGAGCACGTGCGTTCTGACCTGAACGACGAATGGAATTTTCACGGACTGTACTCGGGGACTGGGTACGGACTTGATGGTCTCCCGTGGTGCACCTCGCACTACGCCTTTCACATGGTGCTGTGGCACATTCCTTTCGCGCTCTCGGGCCAGTTTTTTTCGGCCCCAAATGCTGCATTATCATTTGATCCCAAGCTTGCTTGCCCATACAAGGTTCCTTTCTACACATCGTTTGCCACAGGCACTTTGCAATGTGACATCATCCAGAAACACAACCAAGAGACAATGAAGTTCGAAATTTTATCTACCTCGGGCGATGTTTTTTTGCAACAACTAGAGGTCAGTGGTTTTCGATATCCAACTGCAGTTACGCTGAAACAGGGAAAAGTGGTCACGTGGTTTTCACATTAA

Transcript

BRAKERTYJT00000022742

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12215 all species →	Glyco_hydr_116N	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term	Family	Interproscan
PF04685 all species →	DUF608	Glycosyl-hydrolase family 116, catalytic region	Repeat	Interproscan
PF00024 all species →	PAN_1	PAN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008928 all species →	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR024462 all species →	Domain	Glycosyl-hydrolase family 116, N-terminal	Interproscan
IPR006775 all species →	Domain	Glycosyl-hydrolase family 116, catalytic region	Interproscan
IPR012341 all species →	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR052566 all species →	Family	Non-lysosomal glucosylceramidase	Interproscan
IPR003609 all species →	Domain	PAN/Apple domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12654 all species →	BILE ACID BETA-GLUCOSIDASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0008422 all species →	Molecular Function	beta-glucosidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17108	GBA2; non-lysosomal glucosylceramidase	EC:3.2.1.45	Other glycan degradation	ko00511	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.