Gene detail

Detailed information of BRAKERTYJP00000026695.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000026695

ATGAATATCGACTTTACGAGCAGGACAAGAGAAGCTTTGCAAAAGCCTTTGTATCAGAGATGTGAAGAGATTGAAAAATTGATCGAAAGTTCCTCTACACAGAATCTGCATGGCTTCTTTCCACAGCTCCTTAGCAGCATTTTTGGCTATTCAGGCAGCACAGATTGGGGTCTCAAAACCCTCTCTCATGAAAGCAGAGAGTTTGCCATTGTGCGCAAGTTTCTGTCTCCCGATGGTGCTGTTTTCAAACTAATTGACTTGCTGCAAGCTGACGACCAACACAGATACGAGTTCTTCATCAGTTGCCTTCCTTTTCCAACACAAACATCATTAAAGGAAGGCATGATTCCAGTTTTATATCATGATAAAGTACCAATTAGAACACCTGGTGAAACTATCAATGCTGTTTTACTGAACACATTTGAATACTACATGTTTCATTATGCCTACTACATTGTGCACCAGCAGAACCACAGGGAATCCATTGGAAGTTCAACCCAGGACTATCTGTATCTATTTGTTTTGGAGGATTATCTTGAGTTCTTCTTGCCTCCTGTTGGTTCAGCCATCTTGTCCAGCAGCATGAAGGCTAAGACCTCCGTTGGTTCCACTAGAAAAGTCCCTACATCTTGGCATGACCTAAGTCATTATAATTCAAGAACGCAGTATTTTCAAAATCAGTTCAAAGGTCTTATCAAACCAGCATCGGGGAGAACCAGTCCACCTACCACGCATCATGGAATGTTTGATCACACCTCACAAGAAATCTGGAGATCAGAAACATTCCTACAAATCCTGGTAGAATTTTGGCTGAATCAGAACACAGTGGATTCCATTTCAAGCAATGTTCTTTCACGTGGACAGGAGTATTTCATGCCATCTTTAGACCATGTGCGAGTGGTGAGAATGTTAGCAAAGCATGTTCATTCCTTTGTGTATGCCAAGGGGCCGGACGTAGATCAGCTCTCCATTCTGCACCCTTCTGATGAACTAAGGAGGGTCATCATACCTCAGTTTCTTCAAAAGAAATTGTATCATTTCCTACAGCACTGTTTTTCTCATTGGCCTCTCGATCCCTCCTTTAGATATGTTTTGGAGACCTGGCTCAGTTATATTCAACCATGGAGGTATTCAAAGGTTCTTGGTGCTACATCCAGCAGAGGAGATGATGACTCCAGAGAAACTGCCAGTCCACAGTGGAAATCCTTTGTATTTGAGAACCTGCTTTTCTACTCTGCATTATTGTTTGAGTTTGTTTCTCGTGCCTGCCGCTTCAATCTTTGTTCTGCTAAAGATGCTCACCTGCTTTTTAGAGTCATTAAGGTGTTTGCTCAACCACATCTGGTGGACATGATTGAAGAAGGAGAGAATGCTTATTTAACACCATCAGGGAATCGTCGTAACACCCCTCAGACCAACCTTAACACGCCCAGCTCAGCTATCAAGGCTCATATACTGGATCTGGAGGGACCATCATACTCACTTAAGTCATTGTTCCATCTGCCTGGAGCTACAAAGATGGGTGAGCTTCACTCCAGAGTATTAGCCGCCTTGGATGAGGCTACTGTCAAGAACCAATCTCAGCAGTCCATTGACGACAATGAAGGATTTATCTCTGTATTTATGAGGGCCCTTAAAAGTGATACTTCCCAAGGAAGTGACTTTGACAGAAATGCTGAGGAGGGGAAACTTGTGTCGTACTTGAAACAGACCTGCGAGTTAATGTCAAAGATTGTTAGGtcTGCAGATTCCATCGATGGTAGTATATTAAACAGTACCATACAGTGGGAGATAACATCACCTGTCTCTGGAAACAGGAATGTTTCATTAGCTAGTAATCAATCTTCCCTGCCAGACCATTTGGAGACTGATGAAGGAGTGGTACTCACTCCCTTGGGCCGATATCAAATGATAAATGGCCTGCGCAAGTTTGAAGTCAAATACAGTGGTGATCCGGAACTGCGACCAATCTGCAGCTTTGAAAATCCCGCATTGGTGCGTCTATTATACAAGCTGTCCACATATATCAATAAAAAGGTGATTGCGATGTCTTCCAGTAGATACATCAATGCTGCCCCTAAATGA

Transcript

BRAKERTYJT00000026695

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14724 all species →	mit_SMPDase	Mitochondrial-associated sphingomyelin phosphodiesterase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024129 all species →	Family	Sphingomyelin phosphodiesterase 4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12988 all species →	SPHINGOMYELIN PHOSPHODIESTERASE 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0050290 all species →	Molecular Function	sphingomyelin phosphodiesterase D activity	Interproscan
GO:0006685 all species →	Biological Process	sphingomyelin catabolic process	Interproscan
GO:0046475 all species →	Biological Process	glycerophospholipid catabolic process	Interproscan
GO:0046513 all species →	Biological Process	ceramide biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERTYJP00000026695.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.