Gene detail

Detailed information of BRAKERTYJP00000032570.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000032570

ATGTGTAGAGAAACTATTCAAAACTTTGATGTTGCGGCATTTTTTCCACTCACTGTTGGCCTTTCACTGGTCAAGACTTTATTTATGTATCAAATTAAAAGTTTCCCGGAAAACGCTGAAGAAGTGTTGACTGCTGTGGCCACCATAAATGAAGCAATTGAAAATGAGAATTCAACTGAGTTAATTGATAAAATGAACCACCATAATGCTGGCTTGTCTTCAGTAGATGAGAGTCTGTGTAATAGATACTTGAGTCATTTCATGTCTGTTAAGGAGGAGAAAGCACAGGACTGTGGAGTAGGCAAAGATGATCTTACACAGATTGAACTTCAGATCTGTGTTGACTTTGTGAACACTGTAGTACAGGATGAGCATGACTTAATATCAGCAATAGCTGTGATCAATGAAGCCATTGACAAAGGTAATCACAGCAGTACCTTACAGTCTCTACAAGTTGAGGCTGCCAAGCTATCAGGCATCACACCAGCAAATAGCCAACTGTATCAGAAGGTTCTCTTCTCTCAAAAGATGACCAAAGCTCAGAAATCTGATGAAGAGTCAGCAGAATTGTGGCATGATGAGATTCAGCGTAGCTTAGATTATGCCAACCGCCACTCAGATGAGGCTCGACAGTtGGCAGAGGGTGTGACTGCAATCAACCAAGCTATTGATGCAAATGATGAGAGACTGCTGATGCCGGCCCTCACATACCCTCGTGCCAGCATCTATGGTGTCACTTCACAGTGTAGTCAACAGTACCTTGATGAGCTTGCAAAACTCAAAAATGTTAAGAAACAACCAGACAGTGATTCTGTGTGGTTGGAACAGAAGACACCCCAAGGATACATGTATTATTTCAATACTGAAAGTAGTGAAAGTTGCTGGGAAAAACCTGAAGGCTTGAGTAACTCAGCTCTACTAACAAGGGAGGAGATTCAGggTGTGATATCACGAGTCACCGCTCAGTATGACCGGTGGGTACACATGCAGTCCAATGAACCCCTGATTATCAAAATACAGTCCAACTGGAAAGGATACTTAGCCAGAAAGGCTTACGATGAAAGGAGAACTTTTATAAAGGAACATTTACCAGCAattatcaaaattcagGCATTTGTTAGAGGTTTTATTCAAAGACTGAAATACCAAAGGAGGCTTAAGGAACTCAAGAGTCACCCTGATGAAGTGATCATGATTCAATCATGGGTGCGAATGTCGCTTGCCAGAAAGAAGTATTTAGAAAGAAGAAAATACTTCAAAGACCATGATTCTGCTGTAGTGAAGATCCAGGCATGGGTGAGAGCCAATGTGGCTCAAAATGATTACAGAAAACTGATTTCTATGCAAGATCCACCATGCAAGACTGTAAGAAAATTCCTTCATCTTTTGGAACATAGTGATGCTGATTTTGATGAAGAACTAGACCTTCAGAAGTTAAGAGCACAAGTTGTGACAGAGATCAGATCAAATCAGCAGTTAGAGAATGACTTGAGTCTCATGGACATCAAGATAGGACTTCTTGTTCGTAACAGAATCACTTTACAGgaTGTTATACATCATGGAAAGAACTTAAAACGTGAGAAACAAGACATGAGCACCGCTTTGCAGAGAACTAAAGGAATCAAGTCATTGAGTAAAGAAAGCCATGAAAAACTTGAGGCTTATCAAAATCTGTTCTACCTGCTTCAGACAAATCCAGTTTATCTGGCTAAACTCATTTTTGCAATGCCACAAAGTAAATTTACCAAGTTTATGGAGTCTGTTATTCTGACATTGTACAACTATGCTTCAAATCCACGTGAAGAGTATCTGCTTGTGAAATTATTTGATACTGCTCTCAAAGAAGAAATCATCTCAAGAGTTGACCAGATGCAGGACATAGTGACAGGAAACCCAGCAGTCATTAGAATGGTGGTTCACTTTAACAGAGCATGCAGCGACACAGCCAACATTAATTTTATCACCAAACTGGTGGAAGATTATGCAGACATATTCCAAGGGATCGGAAAGCTGAAATCAGAAGGTGTACAAATTCACATTGATCCAGAGGTTGAGCCCACTGTGCAGCTGCACGGTCGCATCCTATTTCATATTCGCTGTAAAGTCGAATGCGAACTCGATGCTCTGGAAAAAGCAGGAATTATCGACACACCAACTGGCCCAACCCTGTGGGTCTCGCCTATGGTTTGTTTTCCCAAGCCAAAGAATCCAGACGAAGTACGATGTTGTATTGACATGCACTTACCAAATCAAGCCGTTAAAAGAGAACGACATTCTACACCTACAGTCGACGAGATGCTGTGTGACCTGAATGATGCCTGCCACTTTAGCAAGCTTGATCTCCGTCAAGGGTACCCTCAAATTCCTCTAGCACCAGAAAGTCGATACATCACTACATTCTCTACCCACAAGGGTTTGCGACAGTACACAAGAGTCATCTTTGGCTTGTCCTTCGCCCCAGCGGTGTTTCAGAACGAAATCCAAAAAGTGCTACAAGGAATTCAGGGAGCAAAGAACATTAGTGATGATATCCTAGTGTTCAGCAAGACAAAAACTGAACATGACCGAGCACTTCAAGCCACATTTCAACGCCTTCGGGAGAAGGGCATAACCCTCAATCCTGACAAGTTTGTCTTTGACAAGTCGCACTTAGACTTGTACGGTTACACCTTCTCAGCAGCTAGCATTTCTGCCGATCCTGGCAAGGTCAAAGAAGTACAAGACATGGCTCCCCCTCAGAATGCCGCCGAAGTGAGAAGCTTACCTGGTTTCACCAACTATGTCTCGCGTTTCATCAATGACTATGCAACAGTCACAACCTCTACGAAAGCTTACACGCCAAGACACACCCTTCAGTTGGACTTCGGAATGCCAAAATGCACTAAATGA

Transcript

BRAKERTYJT00000032570

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00397 all species →	WW	WW domain	Domain	Interproscan
PF00612 all species →	IQ	IQ calmodulin-binding motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR001202 all species →	Domain	WW domain	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR000048 all species →	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14149 all species →	RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0005938 all species →	Cellular Component	cell cortex	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:1903479 all species →	Biological Process	mitotic actomyosin contractile ring assembly actin filament organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERTYJP00000032570.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.