Detailed information of BRAKERTYJP00000035337.1 in Cladopsammia gracilis

Genomic Location: JAJGOT010000246.1:449681...451021
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000627 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06155
all species →
GBBH-like_NGamma-butyrobetaine hydroxylase-like, N-terminalDomainInterproscan
PF02668
all species →
TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050411
all species →
FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan
IPR010376
all species →
DomainGamma-butyrobetaine hydroxylase-like, N-terminalInterproscan
IPR003819
all species →
DomainTauD/TfdA-like domainInterproscan
IPR038492
all species →
Homologous_superfamilyGBBH-like, N-terminal domain superfamilyInterproscan
IPR012776
all species →
FamilyTrimethyllysine dioxygenaseInterproscan
IPR042098
all species →
Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10696
all species →
GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →
Cellular ComponentmitochondrionInterproscan
GO:0045329
all species →
Biological Processcarnitine biosynthetic processInterproscan
GO:0016491
all species →
Molecular Functionoxidoreductase activityInterproscan
GO:0005506
all species →
Molecular Functioniron ion bindingInterproscan
GO:0050353
all species →
Molecular Functiontrimethyllysine dioxygenase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERTYJP00000035337.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP