Gene detail

Detailed information of BRAKERTYJP00000036070.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation CGRAC2 · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000036070

atgcaGCCAAACCAAGGAAGTTCTGTTGTTAAACCCATGAGGAGAGGACTCAGCACTGCACATGCTCGACGTCGTGCAAGAGTTTACCCTAACTCAATCAAAAGGGAGTTGATAAATGAGGATAGTGCAGATGAACTGGGGTGTTCACAAGAATCTAGTCTGGGAAATGGATCAGCGGCTTTCTTGAAAGGTCTTCTCTGTGAAACTGATGGTCTTATCCAGGGAATATCTGACCGATATGAAACACAACGGGAAaATAGTGACTGGATTTACAAGACATTCAGAAGAAAGGAATGTATAAGACATGTTGATGACAACAAAAACCCAGGATTGTGTTGTTGTGGACGCCCCGAAAATAAGCATGGAAAGCTGACAACTGTTCAAGAAGAAAACGAGGAGGCTGAGGCAGTGAATGAAGCAACAGAAGAGAGTGAGTCTAGTGACAGTGAGGATGAACCATTTGAGTTGGAGGAAAGAGTCAAATTTGCTAAGGGTCAAGGTCTTCCCCCATTAGTGAAAACAAGTGGATACCAACAGAAAAGGATTGGTCACAGAAAGACTACAGCTCAAGGAACGTGGTCACCTAAACATCATATAAAAGAGTTCCCTACGAATGGATTTGGTCACATTAAGTTTGTGAATGCATACAATTCATCACTAAAACCTTCTAAGTACATACGCCTTGCGGACAACACTAAACCAGAGTTAACACTGGAGCTGATGGTGCGACAGTGGAAATTAAAGAAGCCAGATATTGTGATATCCATACAAGGAGGACTGAAGAACTTCCAGCTTGATCCACATCACAAGGAGATCTTCAATAGAGGTCTGATCAAAGCTGCCAAGACAACCAACTGTGGAGCTTGGATTATAACtgGTGGTGTAAATCTTGGTGTCATGAAGGCTGTGGGCCAGGCAGTCCAGGAAGGTCAGTCCATGCAGTGGGGTGGACTGTCCAGTCATCGCCGGATCAGATGCATTGGAATCGCAACATGGGGATATGTGGAGAGGAATGAGCTCTTAATCAATCCCCTGGAGGGCAAGGGCTGCTACCCAGCCACATATAGAGTGGAGCATTCATTTCAAAGAGGAAAGCCTGTCTCTCTTAATCCTGACCACACCCATTTCCTCCTGGTGGATGATGGGACACAGGGTCAGTGTGGAGCAAAGGAGGTTCAGTTCAGGGCACGGCTGGAGAGAGTTATCGCCGATAAACCCAACATTCAGGAACAAAAATTTGGCTTTGGTGTTCCTGTGGTGACTGTGGTACTTGAAGGAGGTGAAGATGCACTTAAAGCAGTAAAAGAGTCGGTCAAGTATGGTATCCCTGCGGTAGTAGTGGATGGAACTCGGAGAGCTGCAGATATTCTGGCGTTTGCTCACAACAACTGCGAATGCGACAGGCAAGTTAAGATACTTGTATTCAAGAATGGCTCTCGTCGAGTTCTGGAAGACCAGTTGCCTCGACTGATTGCCAAGATCAAGGAATCTTTTCCTAAGTATGCAGAAGACGAAACGTACATCCAGAAAATCGTAGATATTGTAAACAGTTGCATTTACGATGAACGCCTGATTACCGTGTATAAAATCAACGATAAGAACAACTTGGACCTTGATTTGGCGATTCTCAGTGCATTGCTGAAAGcGCAAGGTGCCTGCAATGTGGACAGTGATTGCGGCTGTAGAATAGATTCGCTGGGTGAAGGAGCAAGTAAAATGGATCAACTCAAACTGGCTTTAACATGGAACAGAGTTGACGTGGCTGAGGAAAAGATATTTACTCCAGATACGGATTGGCCGTCTGGAAGCTTGGATGATATAATGTTGGACGCTTTGCAGTTAGGACGAGTTGATTTTGTGAGGCTGTTTCTCGCTAATGGAGTGAGCATGAGGGATTTCCTTACTGTTCCAAGATTAAGAAGACTTTACAATTCGgcGGATCCTGGAAGCCATCTTTACTCTTTCCTTGCCAACTATGCCGGTGTTTCGAATCCACCGTATTCTCTCAAAGACATCGGCGTCCTTATAGAGGAACTAGTTGGCGCCTATTACGAACCGCTCTACCTGGTCGACACCCCTCATGCCAACGCCCTGGCTGCTGGTGCGGCGGCATTGTTTGGAGCAGCCCCAAGTACAGAGGAAAATACGGATAAAGAAGGTGTTCTGTCAGTGAAATTCCAACCGAATAATAGAGTGAAAGTGGCACATTCTGCGACCCGGTTTGAAAAGCCTTTCAGAGAGCTGTTTTTGTGGGCAGTGTTGCTTAACCGCTTTGAAATGGCGCGTTTTATGTGGGAGAAGGGTGAAGAGGCCGTGTCTGATGCATTGGCGGCTTGTCGACTGTTCCAAGTCATGCATGATGAAATCGAAGACGATTATTTCGAGATGAGGACAGCATTGAAAGAACACGCTAATGAGTTCGAAAACCTAGCCATCGGTGTTCTTGATGAGTGCTATAATGAGGACGAGGTTTTAGCAGAGATGTTAGTTGAGCGTGAGATTCCCAAGTGGGGAGGCATGTGTGCACTCAACTTGGCGGCTGCAGCCAAGGCGGAAAAATTTCTGGCGCATACGTGCTGCCAATCAAGCTTGAACAGCATTTGGAAGTCACGTAGTATGCCTGGAGTCGACTATTGGAAGGTTATCCTTGGTCTTCTCTGCCCActtctaattttaaaaattgtattctACGACGAAGAAAACCACAGATGGTCAGTGCCTTTTTGGAAAAAGCTCCATATCTTCTACAATGCTCCAATCTCAAAATTCTGGGCTCATCTGGGAATGCACCTCTGCTTTTTAGGATTGTAcgcttttgtaattttattttcgTTTCATAAACCTTGGCCTTCTATTTACGAAATTGTGTTACTGTGCTGGGTTGGAGTTATAATTATGGACGAAATAAGACAAGTCATACAGCAAGAAACAAACACATTCAGGAGCAAGTTGGAACTGTATTTCAACACTTCTGTGAACATAGTGGACACGTGTGCTAACATCATCGCCCTCATTGGTTTTGTCCTGCGGTTTTTCGAGGTTACGTGGGAGGCGGCACGCGTTTTGTACTGCATCAATTTTGTCATCTTTTCATTCCGACTGTTCAGAGCGTACTTTGTTAGCGGCTATCTGGGACCTAAAATCATTATGATTAAGAGAATGCTTGCAGATGTGATGATGTGGTTGTGTCTTCTGCTAGTGTTTGTGTGCAGTTATGGTGTATTCAGGCAGGCGCTGTTCTTTGCTAACAAAGATCCTTACTGGGGTGTGATTAATGACCTGTTCTACAAACCTTACTGGCATGTGTATGGAGAGCTGTTCGTCGATCAGGAACCGGAAGAAGGAAAGCTGACCACGGGCGAGATTCCATTGCATGGTGGCGAGCATTTAAAGTGGATTCACAGAATATTTATGGGAGGATATCTACTCATTACAAACGTGCTTCTTATAAATCTTCTCATCGCTATATTCAGTAACGTGTTTAACGAGGTTGAAGTGAATTCATATAAGATCTGGAAATACCAGTACTATTACCTTGTGATGGAGTACAGCAAACAGCCACCGTTTGCACCACCTTTCGCCATCATTTATCACGTAATTGAGTTTGTGCAGTGGCTTTGGAAGAAGTGTCGAAAACCCAACAAAGTTTCTCCGAAATTCACTGCAGAGGATCTGGAACTGTTGAGGCTTTTTGAAATAGAGAGCGCTGCCAGCTATCGACAGAGAGTGGAAGAACAAAAGAGGACTGGTACCGAGGAAAGGATAAAAAAGACCAATGAAAGGGTGGAACACTTAGTGAAAAAGGTCGCAGAGTTGCAAGAAACCCTTCAACAGTATCTCACAAATGTCACTGAAGACTCGCAGTAG

Transcript

BRAKERTYJT00000036070

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18139 all species →	LSDAT_euk	SLOG in TRPM	Family	Interproscan
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041491 all species →	Domain	TRPM, SLOG domain	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR050927 all species →	Family	Transient receptor potential cation channel M	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13800 all species →	TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005261 all species →	Molecular Function	monoatomic cation channel activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0070588 all species →	Biological Process	calcium ion transmembrane transport	Interproscan
GO:0070838 all species →	Biological Process	metal ion transport	Interproscan
GO:0098655 all species →	Biological Process	monoatomic cation transmembrane transport	Interproscan
GO:0099604 all species →	Molecular Function	ligand-gated calcium channel activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERTYJP00000036070.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.