Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families
| CDS |
| BRAKERTYJT00000036943 |
| Transcript |
| BRAKERTYJT00000036943 |
| Protein |
| BRAKERTYJP00000036943.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06839 all species → | zf-GRF | GRF zinc finger | Domain | Interproscan |
| PF01131 all species → | Topoisom_bac | DNA topoisomerase | Family | Interproscan |
| PF01396 all species → | zf-C4_Topoisom | Topoisomerase DNA binding C4 zinc finger | Domain | Interproscan |
| PF01751 all species → | Toprim | Toprim domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR010666 all species → | Domain | Zinc finger, GRF-type | Interproscan |
| IPR013824 all species → | Homologous_superfamily | DNA topoisomerase, type IA, central region, subdomain 1 | Interproscan |
| IPR013497 all species → | Domain | DNA topoisomerase, type IA, central | Interproscan |
| IPR006171 all species → | Domain | TOPRIM domain | Interproscan |
| IPR034144 all species → | Domain | DNA topoisomerase 3-like, TOPRIM domain | Interproscan |
| IPR000380 all species → | Family | DNA topoisomerase, type IA | Interproscan |
| IPR013498 all species → | Domain | DNA topoisomerase, type IA, zn finger | Interproscan |
| IPR003601 all species → | Domain | DNA topoisomerase, type IA, domain 2 | Interproscan |
| IPR013826 all species → | Homologous_superfamily | DNA topoisomerase, type IA, central region, subdomain 3 | Interproscan |
| IPR013825 all species → | Homologous_superfamily | DNA topoisomerase, type IA, central region, subdomain 2 | Interproscan |
| IPR003602 all species → | Domain | DNA topoisomerase, type IA, DNA-binding domain | Interproscan |
| IPR023405 all species → | Homologous_superfamily | DNA topoisomerase, type IA, core domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11390 all species → | PROKARYOTIC DNA TOPOISOMERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0003916 all species → | Molecular Function | DNA topoisomerase activity | Interproscan |
| GO:0006265 all species → | Biological Process | DNA topological change | Interproscan |
| GO:0003917 all species → | Molecular Function | DNA topoisomerase type I (single strand cut, ATP-independent) activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005694 all species → | Cellular Component | chromosome | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K03165 | TOP3; DNA topoisomerase III | EC:5.6.2.1 | DNA repair and recombination proteins | ko03400 | deepkoala |
