Gene detail

Detailed information of BRAKERTYJP00000037924.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000037924

ATGCTATGTAGCCCTGGGTGCTGTTTTGTATCTGTAGCGTCCCCAGGGGATGATGAAGGTGGTGAGGTGCCGGTCGTCTTTATGCAGAGGGATGCTATGGTAGCCATTCCAGCAGTCAAACACTGTCTTTTTCTTGCCACTTGGTATAGAGCGTGCTTGGTGGAAAGGGATTTGTGTATGGTGGGTTTCCCGGGTGGCGTGGAGGTTCAGTGCTTGGAAGTCGACTGTGCGACAAGGCTTGCCATTTTTCTTGGCACATACCACCATACGGGAGAGACTTTTGTTGCTTTGGCATGTTTGGTGAGCTGTTGTTGCCGTTTTATGTTGTTTTCTGGCGATATCTTGTCGATTCGTCATGGTACGGAGGCATTTCTTGTGTCgcgaaaatccaagatggtggccgaATTCAGTGAAATGTTTAGTGATTATGAACCTACAGATACATCAgGGTTTCGTGCTGGAAGCATAAAGGAAACGGCAATTATTGACGATAACATTGAGGAGGAGGAAGAAGAAGTGAATGAAAGTGACATTGATGAATCCCGTGACCGATCATTAAGCTGTGAAGAGTTTAACAAAATCATGGAATATAGTGACAGAGTATGCAGTGATCTTTTACTTAAATCAACAGCAGCTGCAGTGCAAGAATTACCATCTGAGGACAAGGCAGTCACTCTTGACGATATAGCTCAGTATAGCTCTGTTTCAGAGTATTCAAGTTTTCTTCTGTCCAGGATTCTTAATGATGCAGGCTTAAATGGCATGTCAAAGGATTTAGAAAACACCTTTGTTATGTCTCGGAACAGTAGAAACTTTCTTGAAATGCAAGGTATCGAGGGTCTTGCTGACAATTCTAGTTCAGATTCCAGCTCAACAAGATCTTCAAGAATTAGTGAAGAAGTGAGTCCTGGAAATCGTATTTCTGGATTTTCTACAGCCTCAACTTTGAGTGCTGTCTCTGACAGTTCAAATGACAGTGACCTTTCAGTGACTCCTACAGTCACAGTCACAGAAAGTGGGGAAACTTGCTATGAGTTCCCTCCTGCCAAAGACGAAAACTGCAACAGTGATGTTGCGGCTGTTGTAAAGCCTTACAGAAATAACAGTGGTCTTGAAGCCATTAAGGAGGTGTCAGACACAACTGAAAGTGATGATCCAACATATGCAAATGATTCTGATGATAGTTCATTGAAATCTGAGAAAAGGTCCAAGTTTTACATTGACTCAGAACTTGAAGATCTGGAACAAAAAAGTGAAAAGAATACATCATCTGTGATCCACTGTAATGGGAAAGTGGATGGTAAAAAGACACATGCTTCAATACAGGGAACTTATTCAAATTCATCTACTAGAAGCAGCAACGACTTCTCGTGTGATCAGAAATTTATTTGTGGAAGGAAAGAAAGCACTGTAAGTACACAAAGTGGTGAGTCTCTCCCAGATGATGATGAGGAAAGAGATGTGATCAGTGAGTTtaagaaaagagaagaaaaattaaCGGCCTATGGAAGTTCGTTGCGACTTAACGTGGGGGGAAAGAAGggCTCAAGGGCTGCAAGCCTTACTCCAGAGGACTTGGACATGATAAGCCAGTTTAGTGCCACCAGAACAATACAGACTGCAGGAAGCATCCATCCTTACCTCTCAAGCCTAGTGAATTACATTCACCCAGTTCCATTCAGTGGATTTGATGAAGCAGAAAAGAAGAACATATCATATCACATCTCGTCATTTAATGAGTCAACAGGCTTTGGTTTACTGAAAGCAAGTCCTGTGGAATTTGTAAAATATAACAAACGTCAGCTGTCCAGGGTTTATCCAAAAGGAAGCAGAGTTGACTCAGGCAATTATATGCCACAGGTTTTCTGGAATGTTGGCTGTCAGATGGTTTCTCTCAACTTTCAGACATCAGACTTAGCCTTTCAACTGAATGATGGAAAATTTGAATACAACAAAAGATGTGGGTATCTCCTAAAGCCTGATCTCATGCGTCGGTCTGATCGGCTGTTTGATCCTTTTACTGAGTCAGTTATTGATGGAATGGTGGCAGCTTCAGTCAAAGTCAAAGTGATCTCAGGGCAGTTCCTGTCTGATAAGAAGATAACCACTTGTGTGGAAGTGGACATGTATGGTCTTCCAACTGACACATTACGCAAAAAGTACAAGACTAAGTACATTCAAAACAATGGAATGGACCCAGTCTACAATGAGGATATGTTTGTGTTTAGACGAGTTGTCCTTCCAGAACTTGCTCTCTTGAGGTTTGGTGTGGTGGATGATAATGATAAATTGATTGCCCAGCGAGTTATTCCACTTGATGGTTTACAGTCTGGTTTCCGTCACATTTCCTTGAGAACAGAAAACAATATGCCACTTCCACTAGCAACACTTTTTTGTCAAATTACACTCAAGACGTATGTTCCGGAAAGATATACAGCCATTGTTGATGAGCTCTCAGAGCCAATCAAATACCAGTCTGAGGCAGACAAGCGAGCTGCACAAATGGTTGAAGAAGAAAGCAGTTTGCCAGCATTCATGAGGAAATCATCATCTACACCTGCAATTTCTAAAATGAAGGCCCCTTCCACATCATCCATTAATAATGTTGGCGTTAGTCCACTCCCACAACGATCACGGGAGTCAGTTGTGACACTAAACTACACTGGAGCACGATCTTCATCAGAACAAACACTTATTGAAAGCAACCTGCCCAAGAAACATGACTTCAAATTTTCTCCAATCATTGTAGAAGAACTGAAGAAAGACAAGACATTTATAAAGGTATTCAAGAGGTGCCAGAAAGAGAACGAAGCCCTCTTAAAAAGATACGCAAAGGAGAGATCTGCCATGCAGAGAGATCATACTGGGGAACTTGAAAAGCTTATTACGAACTACGAGAAGATCAAAGTCACTGCTATTAAAACATTTGAGAGGGCAGCGAAGAGATGTGGGGAGGAAAGATCAGAAGAACTGCGTAAAGTCCATGAGAGCAAGATGCTTTATCTTAACAAAACACAAACTGACAAGGCCAAGGAAAGACTATCGGCCCAGACAGATGAATGGACAAACATGATTAACAGACAAGTCGAAGAAGAAATTGGTTTCTATGAAGAACAAGCCGAACAGCAACTAAAAACATTGAAGAAAGTTATGGATTCTGCCCATGAGGTCCAAATCAAAGAGGTTACAACAAGGCATGAAAAGGAGAACGTTGAGATAACAAAGAAACAGACAAAGCAGTCCATGGAGTCTGCTAAAGCACTGCTTCTTGATAAAACCATTCAGTCAAAAGAAGAGAGAGACAGGAGGCAAAGAGAACTTGATAAGCAAAATCTGAAACAGTTTGTTGATGAGAGGCAGAGGttgAGTAAAAGACAGGAGAGAGAACTTGAAGAACTTAAGAATCAACATAAGGAGGAGAAAAAGAACTTGGAAGTAGAATTCCAAAATCTTATGTCAGAAAACCTggatgaaatcaagacaaatggTGAAAAATGCAGAAAAGCTATCCACACTGCCTTTCAAACTGTTTTGCCGACCCACTGA

Transcript

BRAKERTYJT00000037924

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06631 all species →	DUF1154	Protein of unknown function (DUF1154)	Family	Interproscan
PF00387 all species →	PI-PLC-Y	Phosphatidylinositol-specific phospholipase C, Y domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017946 all species →	Homologous_superfamily	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	Interproscan
IPR001711 all species →	Domain	Phospholipase C, phosphatidylinositol-specific, Y domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR042531 all species →	Homologous_superfamily	Phospholipase C-beta, C-terminal domain superfamily	Interproscan
IPR009535 all species →	Conserved_site	Phospholipase C-beta, conserved site	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR001192 all species →	Family	Phosphoinositide phospholipase C family	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10336 all species →	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0008081 all species →	Molecular Function	phosphoric diester hydrolase activity	Interproscan
GO:0004435 all species →	Molecular Function	phosphatidylinositol phospholipase C activity	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0048015 all species →	Biological Process	phosphatidylinositol-mediated signaling	Interproscan
GO:0051209 all species →	Biological Process	release of sequestered calcium ion into cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERTYJP00000037924.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.