Detailed information of BRAKERTYJP00000037962.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation CGRAC2 · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090
all species →		TSP_1Thrombospondin type 1 domainDomainInterproscan
PF05270
all species →		AbfBAlpha-L-arabinofuranosidase B (ABFB) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR007934
all species →		DomainAlpha-L-arabinofuranosidase B, arabinose-binding domainInterproscan
IPR036195
all species →		Homologous_superfamilyAlpha-L-arabinofuranosidase B, arabinose-binding domain superfamilyInterproscan

 PANTHER
No PANTHER signature was detected for BRAKERTYJP00000037962.1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0046373
all species →		Biological ProcessL-arabinose metabolic processInterproscan
GO:0046556
all species →		Molecular Functionalpha-L-arabinofuranosidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERTYJP00000037962.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP