Gene detail

Detailed information of BRAKERTYJP00000038120.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000038120

ATGTTTTCCGTGCGGATTGTCAATACTGATTTCTACATCGCAGCTCCAGTCCCAGATCTCGATGTCTGTAATTCCACATTTCGTGAAACTGCAACCAACAAGGTTCCTGTTATCCGTGTTTATGGCGCTACCCCTGGTGGACAGAAAACATGTCTGCACGTTCATGGTGTCTTTCCTTACATTTATGTACCGTACGATGGAACACAGCCAACTGAGAAATACGTGAAACAGTTCGCTATAAGTGTGGATTTCGCGGTGCAGGTAGCCCTTGGGAAAGCTTCGTCTTCTCGCCAACATGTCTATGAAATTTCTGTGGTTAAAGGAATACCTTTCTATGGATATCATGAAGGAGAAAGAGATTTCTTGAAAATTTCTTTGTACAATCCTTTTCTAGTGACCAGGGTTGTAAGCCTTCTACAGAATGGTGCTATTATGAATAAAGTGTTTCAACCTTATGAAGCTCATATTCCTTATCTTTTACAGttttttatggACTATAATCTTTATGGAATGAATCTGCTTCATATATCAGCAGTGAAATTCAGAAATCCAGTCAGACTTGTGGATGGGGAGGCTGAAACAGTGAAATCCTCTGTTGAAACCCAGAGATCTAAGTCACATGAGGCTCCTTCAACAACTTTTGCTGGAACTCCAAGTCAAATATGGAATGAAGATACTGTGCAAAGGGACTGGATTTTGGGATCTGAAGTTGAGCGAGTCAGCTTCTGTGAGCTGGAGGTTGATGTGCTGGCTTCTGACATCCTGAACAAGCTTGAAATTGGAGTTAACATCGGCACAAATCCTGGCTTGGCTGCTATCTGGGAAGATGAGCAACAGCGACGGAGAGATGCAAATGAGTCTTCACAGATCTCAGCTCCATCGTCACAGGAAAGAGGTTTGATTCAAGAAACGGAAACGGAAAGAAGATTCAAGGAAAGAATCAAAGAGATAATTGATGAGCGTGATCTGCTAATACAAAGCCAGATGGGAAAACTTGGACAAGAAGCATTGTCTCCGCAGGAACTTGCCTCTTTCCAAGACTCTATCTCTTCATTGGCTGCATCTCAACAAGGCTTGGTTGTGAACGACTCATTAGATACTGATGCTGTGTCACAATTGCTGACACAACATGTCCAAGGGATGCTAGTGGTTGTTGATGAAGATGAACCGGTTGTCAATCAAAGTATTGTCCAGGAAGTTGTCGAAGCAAGTCAGGGGTCCTTTTCACAAGAATTATcTTCAAGTATGGACAAAGAAATGATCAACATCTTGGCAAGCTTGGCTGAGGAGTCCAGTCAGCCAAGCAGTCAGACATTAGCACTGAGTCAGAGCATCTTACTCGACCAAGGGGATGAGCTGTCTGACGATGAAGCTGAAGATGTCGAGGAGCTAAGCGAGGCTGAGGAGTCTATTGTGATGTCACAGAGGGTCTGGGACGATATTGAGCATCACTCACCGGGATCTGGTGACGAAGAAGCAGCAGATCAACAAGGCAGTCACGAGGCTTCTCAAAGGGCGTCTCAGTACAACTTGGAGGGAATGTCTGACACGTGGATAGAATCATTCTTGGGCGGGGACATCCCTCAGTTAGACGGAGCTGCGGATGACGACTCCAGTGGACAAGAGAACTTCAAAGCATCACGGAAACGACTTGGTATGGGCAGAACAAGGAACGTCAATCGATTAAACACTTCAAGTAAAGCACCTGATCTGTCCACTTGGAGAGACATACCCTTAGACATACCAGCTCACTTTAAAACGTCAGAGAATGATGTAGAATGTGATAAAACTGAAATGACGTCCAAATGTAGTGATGTAGAGGACAGTGGCCAATCTGTTTGGCCACAGAAAGGGAGAGCGATTCGTACATATTCAAAGAAAGGTATGTCTGCATTTAAATTTGGAAGGACACCACCGTCAGATAGCGAAAAGGCTCAAAAGAGGGATAAGAAAACGGATGTTGTGGTAGATACTGAAGAGGTGAAGGAAGTGAATTGTGAGGACCCGTTCAGGTTGGTTCTTAGTGAATCTAGTGATTCTGAGTGTAACGACTCAACAGAAGTTAATTTAGGCTCAGAAAGCAGTGATATAGCGGCGAGACGGCAAAATCGGAAAGCTCAAGTGGagagagaaagaaaaacaaaaccatCTGCTGCACGGAAAGATAAAAATACAGTGAAATCTAAATTGGACTCAAAAGGGAAAACAATTGTGGCGAGACAGGAAAATCTGGAACTTGAAGTGGAGGaaattaataatataaaaacgTCTTCTGCATTGAACGACCAGGGTACATCTGATGGCTATACTCCTGAGATAACAAAATATTTCCACAGTCCTGGCAAAAAAGCTGATGACaacaataaaagaaaacatcGAGGTAAACAGTTGTCGAACTTATCGCAACAATCTACTTCATGTAAGACACTTGATATGCATCCTACAACACATCCATTGCCTTCTTGCTCTTCACAACAGGAGACATTTTCACGTAAAGCTACTCTGCGTAAAAGAAAACTGTCAGAAGTGGAGAAGAAAGAACGAAAGCTTTCCAAAGGAGCGAGTTCGCGTTGGACTAAACAAAGCAGCGATTTAGTTGCTTCTCTGAGTGTGATACGCGGGGCCATGTCAAATTTAAAAGTGTCCATAGAGGATGCTTCTCAATCATCAATGCTAAACTCAAAATTTGGTGAAGCTCGGACTCGTTTGAGAAACAGACAAGAGACGCTACGTCACAGCTATTCACGTATCGTAAACCAGGGTTTCAGTAGCCCGGTTACGAAAGAAAGGCATTCACCACAACGATCGCCTCTTCTATCGAAAAAGAATGAAAGGTCTCCTTTGTCAAAGAAGAGAACTTCGCCGaagagaaaagaagaaagaatGAAAAAGTATGGAACATTGCCAGTTGTGATTGCTAAGTCACCAAAAAAGAGTTCCGCTGACAATATTCAATTTCCAGAGACGTCAGGTGCAAGGCAACAGTCTGAAGCTCAAACTGGTGTTCCTACGTCACAGATTTCCAGCAAGCCTGCTCTTTTTAAAGATGTTTTCAGCAGTGAGACGGGATATTTCGGGACGGGAATTGCCTCGTCCCGAAGTCGAACACGCGGGCCTGTTGATAGCAACAGTGAACGTTCCAATCGACTGACTGAACTTTCCGCATCGGAAACTATTTCTGTTGCGTGTTCTGATGGTAATGACGAGGAAACATCCCGCAGAAGAACGGGATTATTCTCGTCCCGCCAACTGTCCCTTACATCCGTTGGTAGGAGTGGAGACAAATCTCACAGTGAAACGGGCCACACCCTGTCGCTTCAAAGAAAAGGTCTCAAAAGGAAGCTTGTAGTGGACTCCCAGAAACACCTGACTCCTGTCAGTGACTTGTCTGGCAtgggaaagaaaagaaagcttTCATTAAAACTGAAAACAAGTTCATTGAAGACGGAAGGTGTTGGTGAAGCACTTGTTACACTGGGTGAAGAGCGTTTCATTGAAGAGAAAAAATCTGTTTGTGATGATCAAAACAAAATCAGCAGTCCTAGCCATATTTCACAGCGTGTTTCTATTGATCTCCACAGTCAACAAGCTCAAGTTAACATTGACTATGGTGATAACCTTTCAGGATTTGACAACAAAAAAGAGGTTGCTTTGACCAAAGGTCTATTGGATGATATAACCTGTGTTCCTTCCAGCCCTGGTGAACCTGTTTCAAGCGATGAAATTTCTCCTAAATGCGTCAAGTCTTCACCGACCACAACGGAATCAGATTCCCTTCCTGTTTTGACAAAGGCTGATATCTCATTTGACAAATCTCCAGACAGTTCATACGTTTATGTGTCTGCTGAAAATGAACTCAAAACGCGGGATAACGTATCTAGTGACTCGAATAACGCGCAACAGCTATCCCAAGAAGGTGCTTTTCCAAAAGAAAAAGACTCTGAACTATTGGCCAACGCACTTTTTAACATGTCCTTCCCGTCACCTCTTCCCTGCGGGGATGAATGCTTTTCTCCACCGTGCCCATCGTCACCGTTGGACGCAAAAAGCGATGTCCCAGAACCGAGTGGCCAATATAAGGATTTGAAACGAAAAGAAGTTTTAACTCTCAGAAGTAGCATTGTTGAAGAAGGCAAGACATCAGAAGTTGAGGAATCACACAGATCTTCTGCGATTTCTTCAATAAACCACACTCAACAAACTGGATATTTCAGTCCTGCAGTTAGTAGCGTACGGGAGGAATATGCAGTCTTGCCACTGTGTCCTCAGCTTGGAGAAACACAGTCTCAGTGTGAGAACACCtccattgaaaatgaaaattgtctCGGTCAGAAAATGAGCGagaaagaaacaagaagcgacaAAGAATCTTTCGAATCACACAACAGCTTCGTTAATATTAGCCACTCAAGTACTAATGAAGAAGACGTTTTCATGAATGAAAGTATACTGGAAGAAAACAGTAACTCCGATTCCAATTCAAAGTACAGAATGTCAGAGAACAAACCTTGTGTAAGTAAAACTGTGCTTGTTAACGAATCAAATGAATCATCTACTGACTTAATGAGTCACGAGTCAGTGAGAACAAGAACGCAAGACACGAATGTGACTGATTTGACCGATTTTGCTGCAGCTGATGAGCCAAGCTTTTCCAGTGGAGAAAAAAGTGAGTTTATTCTGAAGTTAAGTACAGAAGAAGAGAATTCAACCGATGCACAATTATCAGTACACAATAACTTGCATGACAGCGAAATGGAAATTTTCTCAGGGAAAGACAATAATCAAGAACAAGAAGACTCTTTGAACAGCCTGCCTATTACGCTTTCTGCTGCAGTTTCTACAGAATCCGTCGGCGAACGTAAAGACCAAATCTCTAGCACACTTGTCTCTCAGAGTGGTCTTCATTGTACCTCAGTTGGTCTCAGTAAAGGTGGCAGCCTTGGAAGTAATGGTGTTGTTGCCATCAAACCTTTGAAGCGACCGCCAACCTCAGAGGAACTATTGAGTTCACTGAAGGATTATGGGCTACCTCAGTGTAAATACCAACAGCCATTCTGTAGTAACCCGGATGATATCCCAGCATTCCCCAGGGAAGTAGGCGGAAGAGTTTTAAGAATTCAATCAAAGGAGGCTTCAAATCTTCCTGAGTTTGAATCATCAAGCTCTTTGCAAGGCATAAAACACTGGAGAATGGTGATGTCCTCTGCTCATGAATGTGCTGTCCAAACCATCGACGATGCGATAAACTTGGACAAAAATGTGGAACTTAAGATCGCTTTAATGGGCGACGGTGATGTTGTGGTAACACCATGTCGAGACCCACCATCCCCGGAGGCGGTGAAAGCCTGGGTACGAGGAAAACTCGCCAAACAGAGTATAAAAGCTAAAAAGCAAGGAGAGGATTTGGCTCTGAAAAAACTGGAACAAAGGAAAGAACTTCCAAAGGACGAATCTTTGGATAATGTCAGACAGGACCGAATTTCAGAGCACAAAAAGGTTGCTGTAAACGTTTCTAAGGCTTATGTAACTGAATTGGGTCTGACCATACCAGCAACTTCAGCTTCGAAAATACCTTCACCGGAAGTGACCAAGAAACTTAGGAGTCCGCCTTTGGCCGCCGATGTTGAGTTGCTTGTTGACAAAAAGCAGACAGAGCTTGCTGATGCTGAAAGTAAGAACAAGCGAGATGTTACGGAGTTGTCAGACTCCTCCATCCTTGTGGAAGTGACTAGTCCTCGCAGTTTGTTTTCGCCAAATGAGGGGAAAATGTTCATATTTGCTTCTGCGACAGAAACGGAAATGGAGCTTTGCAGAAATGAAATATTAGGTACTCAGGCAATGAGCATCGAATGCCATGATGGGCCAACGCATCTCACAAAACTAGCTGTTACTTCAGGTGCAAGCACCGTGACAGTCACGCCATCCATACTTCAGTCACCTGAGCAAACCCCTTCATCAACTCAACAACCGCTATCACCTTCACTGCAGACGCAAAATCCAGTGTTTTCGGCACCATATCACAGCACACCAGTTGCTACAAGGTTAGTCTATGGTGTCCAATCTCCTCGATGCACTCCCATATCAGATGCCATTACTAAGCAAAAGAGACTGGACACTAATATCAAGACATCTGGACAGAAACATGCTGGTACCCAAGCTTCCTCGGACCAGGCTCCTTCGCTACGACAGCAACTGCTGGCCAGTCAGTTCAAGTTCATAACTCCTGGCGCTCAACCGAGGCGCTCAATGCCATGGAACTCGCAGATCGAGGGCCCTTCTCCTAACAACACCTATGGGTTCAAGGTCCCTCAGATGAACCTACAAGATGCCAAGGCCCTTCACGAGGTCCAACATTTGACGCTGTTCAGCTTAGAGCTTCATGTAAGAACGAGGCGTGATGTGAGGCCTGACCCCGAGTTTGACCCCATTTGTGCGATATTCTACTACATTCAAACCGATACTCCTCTACCATCTGGCAAAAATAAAGTCACAGGGATCATATGCGTAGACTCAGAATCCGCCAACATTAGTACTTCTGGAAGAGAAACCAAGGAAAGGAGTTTTTCCAACACACAAAACACCACAAAACTGTCACTGTACAAAGACGCTGTGGCTTCTACATCAACCAGCAACATATCAATGTCTAGAACATCGCAAAACACTAGTGCGCTTTCCTCAAGGCCGCTGTTATCTCGATCAGGTGTCACAAATTACGAAGTCCAATACGTAACTGAAGAAAAGGAGCTCTTTCCTGCTTTGCTTCTTATCATCCGCAAATGGGACCCCGATATTCTGATCGGTTACGAGGTGCAGATGTTTTCCTGGGGATTTCTCATGGAGAGGGCGCTGACGTATGAAATTGACCTTTGTACTCGGTTGTCGCGCATCAAAGGCTCATCTTCTGACAGTAATATGGACGCAGAGAAGGACAGATGGGGCGCAGCGCATACATCCGAGATTAAAATCGCTGGACGGATAATTCTGAATGTGTGGAGGCTCATGAGACACGAGGTGACGCTGACCAGCTACTCGTTTGAGAATGTAGCATTTCACGTTCTTCATGAGCGCATTCCTTTGTTCACATTCCGAACTCTCTCTGACTGGTGGGACCACCGAACTGCACTAAATCGATGGAGAACTGTCGATCATTACGTCAGACGTTGTCATGGTAACGTTAGGATACTAGAGTCCGTGGATTTTATTGGTCGGACTAGTGAGCTCGCAAGGCTCTTTGGAATATTATTCTTCTCCGTGATATCTCGCGGATCGCAGTATCGAGTTGAGTCAATGATGCTGAGGATTGCAAAGCCGATGAACTATATCCCAGTCTCTCCGAGTGTGGAGCAGCGGGGAGCAATGCGAGCTCCAGAAACCATTCCTCTGGTGATGGAGCCGGAATCCCGGTTCTACAGTGACCCAGTCCTGGTCCTAGATTTTCAGTCTCTGTACCCATCTATGATCATTGCCTACAACTACTGTTTCTCTACCTGCCTGGGGCGAGTCAGCTGCCTGTCGGAGTAA

Transcript

BRAKERTYJT00000038120

Protein

BRAKERTYJP00000038120.1

MFSVRIVNTDFYIAAPVPDLDVCNSTFRETATNKVPVIRVYGATPGGQKTCLHVHGVFPYIYVPYDGTQPTEKYVKQFAISVDFAVQVALGKASSSRQHVYEISVVKGIPFYGYHEGERDFLKISLYNPFLVTRVVSLLQNGAIMNKVFQPYEAHIPYLLQFFMDYNLYGMNLLHISAVKFRNPVRLVDGEAETVKSSVETQRSKSHEAPSTTFAGTPSQIWNEDTVQRDWILGSEVERVSFCELEVDVLASDILNKLEIGVNIGTNPGLAAIWEDEQQRRRDANESSQISAPSSQERGLIQETETERRFKERIKEIIDERDLLIQSQMGKLGQEALSPQELASFQDSISSLAASQQGLVVNDSLDTDAVSQLLTQHVQGMLVVVDEDEPVVNQSIVQEVVEASQGSFSQELSSSMDKEMINILASLAEESSQPSSQTLALSQSILLDQGDELSDDEAEDVEELSEAEESIVMSQRVWDDIEHHSPGSGDEEAADQQGSHEASQRASQYNLEGMSDTWIESFLGGDIPQLDGAADDDSSGQENFKASRKRLGMGRTRNVNRLNTSSKAPDLSTWRDIPLDIPAHFKTSENDVECDKTEMTSKCSDVEDSGQSVWPQKGRAIRTYSKKGMSAFKFGRTPPSDSEKAQKRDKKTDVVVDTEEVKEVNCEDPFRLVLSESSDSECNDSTEVNLGSESSDIAARRQNRKAQVERERKTKPSAARKDKNTVKSKLDSKGKTIVARQENLELEVEEINNIKTSSALNDQGTSDGYTPEITKYFHSPGKKADDNNKRKHRGKQLSNLSQQSTSCKTLDMHPTTHPLPSCSSQQETFSRKATLRKRKLSEVEKKERKLSKGASSRWTKQSSDLVASLSVIRGAMSNLKVSIEDASQSSMLNSKFGEARTRLRNRQETLRHSYSRIVNQGFSSPVTKERHSPQRSPLLSKKNERSPLSKKRTSPKRKEERMKKYGTLPVVIAKSPKKSSADNIQFPETSGARQQSEAQTGVPTSQISSKPALFKDVFSSETGYFGTGIASSRSRTRGPVDSNSERSNRLTELSASETISVACSDGNDEETSRRRTGLFSSRQLSLTSVGRSGDKSHSETGHTLSLQRKGLKRKLVVDSQKHLTPVSDLSGMGKKRKLSLKLKTSSLKTEGVGEALVTLGEERFIEEKKSVCDDQNKISSPSHISQRVSIDLHSQQAQVNIDYGDNLSGFDNKKEVALTKGLLDDITCVPSSPGEPVSSDEISPKCVKSSPTTTESDSLPVLTKADISFDKSPDSSYVYVSAENELKTRDNVSSDSNNAQQLSQEGAFPKEKDSELLANALFNMSFPSPLPCGDECFSPPCPSSPLDAKSDVPEPSGQYKDLKRKEVLTLRSSIVEEGKTSEVEESHRSSAISSINHTQQTGYFSPAVSSVREEYAVLPLCPQLGETQSQCENTSIENENCLGQKMSEKETRSDKESFESHNSFVNISHSSTNEEDVFMNESILEENSNSDSNSKYRMSENKPCVSKTVLVNESNESSTDLMSHESVRTRTQDTNVTDLTDFAAADEPSFSSGEKSEFILKLSTEEENSTDAQLSVHNNLHDSEMEIFSGKDNNQEQEDSLNSLPITLSAAVSTESVGERKDQISSTLVSQSGLHCTSVGLSKGGSLGSNGVVAIKPLKRPPTSEELLSSLKDYGLPQCKYQQPFCSNPDDIPAFPREVGGRVLRIQSKEASNLPEFESSSSLQGIKHWRMVMSSAHECAVQTIDDAINLDKNVELKIALMGDGDVVVTPCRDPPSPEAVKAWVRGKLAKQSIKAKKQGEDLALKKLEQRKELPKDESLDNVRQDRISEHKKVAVNVSKAYVTELGLTIPATSASKIPSPEVTKKLRSPPLAADVELLVDKKQTELADAESKNKRDVTELSDSSILVEVTSPRSLFSPNEGKMFIFASATETEMELCRNEILGTQAMSIECHDGPTHLTKLAVTSGASTVTVTPSILQSPEQTPSSTQQPLSPSLQTQNPVFSAPYHSTPVATRLVYGVQSPRCTPISDAITKQKRLDTNIKTSGQKHAGTQASSDQAPSLRQQLLASQFKFITPGAQPRRSMPWNSQIEGPSPNNTYGFKVPQMNLQDAKALHEVQHLTLFSLELHVRTRRDVRPDPEFDPICAIFYYIQTDTPLPSGKNKVTGIICVDSESANISTSGRETKERSFSNTQNTTKLSLYKDAVASTSTSNISMSRTSQNTSALSSRPLLSRSGVTNYEVQYVTEEKELFPALLLIIRKWDPDILIGYEVQMFSWGFLMERALTYEIDLCTRLSRIKGSSSDSNMDAEKDRWGAAHTSEIKIAGRIILNVWRLMRHEVTLTSYSFENVAFHVLHERIPLFTFRTLSDWWDHRTALNRWRTVDHYVRRCHGNVRILESVDFIGRTSELARLFGILFFSVISRGSQYRVESMMLRIAKPMNYIPVSPSVEQRGAMRAPETIPLVMEPESRFYSDPVLVLDFQSLYPSMIIAYNYCFSTCLGRVSCLSE

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00136 all species →	DNA_pol_B	DNA polymerase family B	Family	Interproscan
PF03104 all species →	DNA_pol_B_exo1	DNA polymerase family B, exonuclease domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR023211 all species →	Homologous_superfamily	DNA polymerase, palm domain superfamily	Interproscan
IPR006134 all species →	Domain	DNA-directed DNA polymerase, family B, multifunctional domain	Interproscan
IPR030559 all species →	Family	DNA polymerase zeta catalytic subunit	Interproscan
IPR006172 all species →	Family	DNA-directed DNA polymerase, family B	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR006133 all species →	Domain	DNA-directed DNA polymerase, family B, exonuclease domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45812 all species →	DNA POLYMERASE ZETA CATALYTIC SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0000724 all species →	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0016035 all species →	Cellular Component	zeta DNA polymerase complex	Interproscan
GO:0019985 all species →	Biological Process	translesion synthesis	Interproscan
GO:0042276 all species →	Biological Process	error-prone translesion synthesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERTYJP00000038120.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.