Gene detail

Detailed information of BRAKERTYJP00000040928.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000040928

ATGTTGATTGGACAAGACCACTCTGGAAAGACCAGCCTCAAGAACTCGCTAATAGGAAAACCCTTCAATCCAGATGAAGACAGCACTGTGGGGATAGATGTTGATCCCTCATATTTTAAAGTCTCGACTCAGATTTGGAAGGCAGGGGTGAACGCAGAGGACACTCAAGCGACAGATGCTGTAAAGGCCATTTCCTTTGAACACCACGCGGCTCGTTTGGTTGCGGAACATTTAAGAGAGGAGGAAGAGAATGTTCTTAAAGTGGGAAGTATGAAGATTATGAAGTCTGCATCTTCAGATGTGTCTATCTTAAGTAACTCAGCTCAGTTGTCCTCACCATCTAGTGACACATCGAGAGATGCCAAAGAATCTATTCAGATATCAAAAGATCCAAGGGTCCATGACAGGAAACTCTTGCCTGATACCTCCTCTGTTCCAACTCTGAGGGGGGAAGAACACCCTCCTCTTACCTTACCCAAAATACCAGAGGGGGTAGCAACTTTGATTAAAACGTTACTACAAAAAGTCGAGAAAGTGAAAGATCAAGAAGATATATATTCAATTTTGTGGGATTTTGGTGGACAAACAGTCTACTATGCAACTCATCCACTTTTCATCACAGCAAGAGCAATGTACCTTTTAGTTTATGACCTCAGCCGAGACTTACATGAAAGAGCTAAACCCGTTGTGAAGCAGGGAATGTACAAGAAGATTTTAGACAGCCATGGCTCGAAAGCCAATCTGGACTACCTTAATTTTTGGATGACATCCGTTGCTTCTCTAGGTAATTCAGATGAAAACTCGTATATATGGTTAGATCTTGTGGGAGTGAATATTCCCCCTGTGTTCTTAGTTTGCACTCACGCTGATAAACCCTATGACGGAGCAGATCCGTTTGCACTCGCCAATGAGGTATTTGATGCTCTACAGACCAAACTCTACAGGAACCACTTGTATGAAGATGTGTTTGTCGTTGATAACACAAAGTCCGGCGTTGAATCTGAGTGTTCAGAAGTAAACCGGTTGCGGGAAAAAGTACTTGCTGTTGCTAAGGAGCTTCCTCAGATGAAAGAAGCCATCCCGATCAAGTGGTTGAAATACGAGAAGACTCTTCAAATGACAGTGAAAGAGGGGTATAAATGGATTTCTCTTGAAATGGCGAAACAAATTGCATCTAAAGTGTGCGAAATTGATGATGATCAAGAATTTCGGACATTGCTGAACTTTCTCCATGACCAGAgaattttgattcattttgatGACACCCCAGTGTTAAACAATTTGGTTGTCTTGGACCCTCAGTGGCTAGTAGATGTGTTTAAGAAGGTAATAACTGTTAAGCGATATGAccaaaaagaaagagaatttaAAGAATTGTGGCAGAAGCTTGAGACAACAGGCATCCTGGATGAAAACCTGTTAGAACATATGTGGGGTCCTTTATTAGACCACCAAGAGACGTCCGCGAGTCTTATTGAAATTATGGAGAAATTCAGCTTGCTGTGTCCTTGGCCTTCATCAGATGCTTCATGTGGCAGGCAGTACCTGGTACCATCCATGTTGATGTGGCATCCACCGCAAGATATCATCGAGTTGGTTTCCTCTGCACAAATTCCTTCTCTTTTCCTCAGGTTTGAATCTGGACAAGTTCCTCCAGGCGTGTTTCCCCGCCTCGTTTTGCAGTTCTTTCAATGGGGACAAGATGAATTTTGGAGCCCAGAGAATCCTCATTTGTATCTCAATTTTGCCCGATTTTACACCTCTAAAGACGAGGATTGCTCTGTGATCCTTCTATGCCATTCCTCGTCCATTGAGGTTGTTGTTCACAGAGGAAATCTCACTGATGACCCGACAGAAAGTTTATCGTCCAAGCTGAAAATGTCTGCAGATGTCAACTATGATGCATTCCAAATAGCCTGTGCTCGTGCTGTGCGTAGGAAGCTGGGACTGATGCTTGAGTGCATGCGTAACGAGTTTTCCTGGTTGAAGAATATGAAATATGAAGAAGGATTCATCTGTTCGATCTGCTGCCAAGGACATGCAGTCAAATTTTGTTGCACTCATCACAAGCAGGGTTGTGAGCAAGAGGAGTGTCTGCACTTCTGGTCTGAGTCTGACTTGCGCAGTGCCAAGGAGTTCGTCAGATGCCGCAGGTGTGCTACTGCCAAGATTGACAAAGTTGACGTCAAGCGGTTTGCACCTTGGATTAGTCAAACTTCAGATGAACAGCTTACAGCCGACGAACGTGATGGAAGCCTTCCAGCTTCTGAGGCAGGATATGATGAAACATTGCTAGCACTTGCTAGTAAGGCCCTAAAGTCTCTGTCGTCGCAGTCATGTGATTCCAAAGAAGTTGTACTTCAACTGCAGCTCGATCAGGCTTCTTTGGAGCGGCCAGATCCCGAAACCAAAAGATTGATCCGTTGCCTAGCAACGAAGGCAAAACAATCAAACAGGCTTGACGTTATCAAACACCTGAGAGAAATTACACCAGCTGGAACTGCAGGTCCTCTGTTGCCTGAAGGCCTTGATATTCGGAATATTCCTGTTCGCCAGATGAGAGATCTCACAGTCGAATTGAGCAGCGGAGAGGAGTGGAAGGTGGTTGCTGAAGAACTGGGCTTGACACCACGAGAGATTCGTTTCCTTGACAAGAGAACTCTAAACCCATGTGACGCTGCTCTAGCGTTTATTTCTAAGCATCGCTACATAAGTGTGGGCTACCTGTACAACAAGCTAAACAAATGTGGGCTGCCTGTGCCAGCTGACCTTCTGTAA

Transcript

BRAKERTYJT00000040928

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16095 all species →	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF08477 all species →	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032171 all species →	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47679 all species →	PROTEIN TORNADO 1	Interproscan

Gene Ontology

No Gene Ontology signature was detected for BRAKERTYJP00000040928.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERTYJP00000040928.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.