Gene detail

Detailed information of BRAKERTYJP00000040933.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00288 all species →	GHMP_kinases_N	GHMP kinases N terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006204 all species →	Domain	GHMP kinase N-terminal domain	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10977 all species →	DIPHOSPHOMEVALONATE DECARBOXYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004163 all species →	Molecular Function	diphosphomevalonate decarboxylase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019287 all species →	Biological Process	isopentenyl diphosphate biosynthetic process, mevalonate pathway	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07987	RAET1; retinoic acid early transcript 1	-	Natural killer cell mediated cytotoxicity	ko04650	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.