Gene detail

Detailed information of BRAKERTYJP00000043501.1 in Cladopsammia gracilis

Genomic Location: JAJGOT010000355.1:707394...709137
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001593 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00241 all species →	Cofilin_ADF	Cofilin/tropomyosin-type actin-binding protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002108 all species →	Domain	Actin-depolymerising factor homology domain	Interproscan
IPR029006 all species →	Homologous_superfamily	ADF-H/Gelsolin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10829 all species →	CORTACTIN AND DREBRIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0005884 all species →	Cellular Component	actin filament	Interproscan
GO:0014069 all species →	Cellular Component	postsynaptic density	Interproscan
GO:0030027 all species →	Cellular Component	lamellipodium	Interproscan
GO:0030425 all species →	Cellular Component	dendrite	Interproscan
GO:0030427 all species →	Cellular Component	site of polarized growth	Interproscan
GO:0030833 all species →	Biological Process	regulation of actin filament polymerization	Interproscan
GO:0030864 all species →	Cellular Component	cortical actin cytoskeleton	Interproscan
GO:0045211 all species →	Cellular Component	postsynaptic membrane	Interproscan
GO:0045773 all species →	Biological Process	positive regulation of axon extension	Interproscan
GO:0048812 all species →	Biological Process	neuron projection morphogenesis	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:0061003 all species →	Biological Process	positive regulation of dendritic spine morphogenesis	Interproscan
GO:0098974 all species →	Biological Process	postsynaptic actin cytoskeleton organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERTYJP00000043501.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.