Gene detail

Detailed information of BRAKERTYJP00000045177.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000045177

atgaaaatttccaCAGTTGTAGGACTGCTAATTGCATCCCACTTTATCCAGGGGCTGTTAGGGCTTCCAGTAGACCGAGAACTTTATCGTGTTAAAAGAAAGGGAGATACAGGAATTGATCTTAATGCGAAACTTGTTCGTAAAGTTCGAAGAACACAAGATGATAAAGAAACCGAAATAAAGCACAAAAGACGGTTTTTTGCTCCAGAAACAACAGAACACAAAACAGACGAagattacaaaacaaaaatggaAGCAAGATCGTCTCGCTCGTCCCGTGAGGATAATGACGTCACAGCAAGGCGTCCTGAGAGATTCCGTTTCCGAATCCGTAAGAGAAGCCCGGATGAAGGCGAGATATCTTTAGGCACAAGGGAAAGTTCCGGTTCAGGCAATCAACTAGGAGATAAATCAACTTCCGGTTCTGGATTATGGAGTTTTAAGTCAAGTGAGCCAGTGATACAAACAAAGCAAACCGAAAAGAGAAGTATGAATTCAAATTCACTTGGCAGTCTCTTATCTGCTTTGAAAGCGATCAGTTCTCTTGCACCAGACGAGGGGGAAACTTCCGGTGATGAAATTGACGCTTCCGGTTCCGGGTTGTGGCTTGCACAGGAAAATGAAGTGGATGATGATAAATTGCCGAAGTTTTTTCACGATGACAGAAACTTTGGAAGTGGAGAAAACCCTGAAGAAGCCCTGAATATGATAAACGAAGCAGCTGAAAAGGAATTAAGTAAGAAGATGGAGGATTCCAGCAGCGGGGAAGCACAACATGAAACTGGGAGGAAACTATTCAAGAGAGATCTAAAAAGCGATTCACTAGCGGATGATTTGATGGCCGCCGTTGAGAACGTGAAGGATAATCGTCATTCTGATCCAGAGGATGACGTCATTTTATCCTCAGGATCCGCAATGCAAGAAAGTGACGATAACATTACTGAAAAACTTGAAGATGAAACATCTGGACAACCGGATGAAGATCAATTTACAGAAAAACCGGAAGTCAAGACTCAACTAGTGAAGGCTTCATCGGAAGCCAAGTTTATACGATCTTTAACGGATGTGATATTACCAGACTCGTTTTACCGCGCAAGGAGATCGTCCCAAGAAAACGCCTTCCTGCGTTCTGACAATAACCTCGGTGAAAACGACGCGTTAGATAGTGACAGTCTAGTAGCGCGGTTTTACCGCGACCAGAACGCACACGCAGACACACCGGATATCATGGAATCTTCTGTGGCATCCCTTCCTAGCGAGACCGAAGCTGTTTTCAGCGCCGGAAAACAAGCAAAACCGGAAAAACGGGAAGTGTACTACAAACATTCTGGAGACTTCTCAGAGCCTCGCGTCGTATACACGCGCGAGATCAGGAATGGACCGGATCCAATCATAGAGCGGCCAGCGGTTTACTCACGGAGCGAGGATGAGAGTGAAATGGATTCGAGTTTTGGAGGAGAAGGTGATGACGATGACGAGGCTACACTGATGATCCATGAAAGAGAGATTAGAGAAGATGGATATGTTGGTTGCTACGAGGACAAGTCCCCTGACCGAGATCTTCCCACTATTCTCTCGGTTCCCCATCTTACTCCCGACTCGTGCCGCAGTGCATGCCAGGGCGCTGGACACGCTTACGCCGGAGTGCAGTATGGGTATTTGTGTCGATGTGGTGATTCTTACGGCAAGTATACTAAAGTCCCGGATGAAGAGTGCAATGCTCTATGCTCCGGAGATAAGGCGCAAAGATGCGGCGGTTTTTGGAGGAGCGCGGTTTTCACGACTGACGGAGCAATGCAACCTTCTAAGCGTGGAAACTTCTTTCACATTGACAGTGTTCAGCCCATGACTGAAGATATATTCGACATACCACGCAATGAAATCCCGTCAGGTGACGACCAGTCCGGGGAAATGTCAGCAATAACGGAAACTGCAACTGTGTCAGAGTCGGCTGCACCGACTCACACGGAACCACAACCCAAGCATGCAGCTACCGTGAAAGAATCATCCGGCGCTTACACACAAGGAATACACAGTGCAACATCCCTTCAAGAATCTCCGGTGCCATCAATTCCTGGGATAACCGTGCAAGAATCCCCGTTGCCATCCAGTCCTGAGGAGGAAAATGCCCTAGAAGACGACACCGTTGCGCAAACTCTATCTGCTGAAGTTTCTCTTGCGCAAGCGTCAGATGACAAGACTACGCATACCACCAAAGAAACCACTAATGTGCATTCTCAAGATTCTGCGTTTGTGAATAGCCCTGAACCTGCACATGATCTCACGTCTACGCCTGCGATTTCTCCTAACCCTCCTTCCCAAGATTCTCAGCGGTCAGATATTGAAGCTTCTACTCAACAAGTCACTGTGCCATTAGACTCACCAGTGTTAACCACTCAAGAGGCATCGACAGACATCCCTAGTCAGCATGATCAGGTACCTCAGGGTACGCATGTGAGTCAGCTCATGTACTTACATCAACAACAAGACATCTTATCCAAACCGACTCCTAAAACAATCGTCGCGGTGCCACCTGGGAAGGTGGAAGCGGGCAcTGTGGCGTACACAGGAACAATTAAGCTGAAACAGAGCTGGTTAGATCAGTTTGAGGACGCAAATAGCGCAGAGTCCAAAATTTTGTCAGGAAACATTGAACAAGCGtTTAAAAGGGTATTCAAGAACGAACCAAAATTTGTCAATGCTGAAGTCGTAGGATTTAGAGAGGGTCTTGTGAAGCACAATCCCAACACGATACGTAAGGTGATTGCTCCATTCATCCTAACGTTTAAAAATGGCGCCAAAGGCATCGAAGAGAAACTAAAAGGCATGGTGAAGAATTCGGAGAGACTTGACGACATGCCTGTTTACAAGAATTCACTTCAGATAGCTGAGTATGGCCACTCACCGGCTTCAGAAAAGGCGGTAACGACCAACGACACAGTCatggaaaaacatgaaagcgtcaaggaaaaacatgaaagcgaagATAAGAAGAGAAGCACCGTGACTGTTCcaaACGGTGACGTTGATCCGTTTCTTAAGGACATCTTTAATCAGATTTCTTCCTGA

Transcript

BRAKERTYJT00000045177

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01822 all species →	WSC	WSC domain	Domain	Interproscan
PF01390 all species →	SEA	SEA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036364 all species →	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR002889 all species →	Domain	Carbohydrate-binding WSC	Interproscan
IPR000082 all species →	Domain	SEA domain	Interproscan
IPR051836 all species →	Family	Kremen receptor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24269 all species →	KREMEN PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10638	UHRF1, NP95; E3 ubiquitin-protein ligase UHRF1	EC:2.3.2.27	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.