Detailed information of BRAKERTYJP00000047813.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Transcription factor familyHTH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05225
all species →
HTH_psqhelix-turn-helix, Psq domainDomainInterproscan
PF03184
all species →
DDE_1DDE superfamily endonucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007889
all species →
DomainDNA binding HTH domain, Psq-typeInterproscan
IPR004875
all species →
DomainDDE superfamily endonuclease domainInterproscan
IPR050863
all species →
FamilyCentromere and Transposable Element-Derived ProteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303
all species →
TRANSPOSONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERTYJP00000047813.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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