Gene detail

Detailed information of BRAKERTYJP00000048010.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000048010

ATGTTTTGCAGTAATTGTGGCAGTTTGCTAAAGGAAAGTTTCAAGTTTTGTACAAAATGTGGAAATCCATCGGGCCAGAACTCTGATGCTCGTCCTTGTACGCTTGAGCCGATTGATAGTGATGGCCGAGCAGGAAGCAGCACAAGACCTACACCAGGTACAGTGACCTCTGATGAAGCCATTCCTACATTTAACACTTTCATGCAAAAGAAAAAGGAAGAGAGAATGTCGCACTTcaagaagaagacgaagaagaggACTAATGAAAAGGAAGAGCCGCCCGTGACAATCAACGTTGGAATTATGCGTTACGTGGAAGAGGAAAGCTCGTTCAAACCTCAACGAGGCAAAAGTTTGCCACTAAAACTTCGCAAAACGGCAGAGAACGAAGAGATTTTGAAGCTTGCAGTAGCAAAGCACGCAATGCACAATGGAAATGAAATTTTGCACAGCCTTCCCAGTGGCTACAAGTTACTATATCCGGATGGAACAGAAGTTCAAAAACTTAAAGAATCAGATCAGGCTTTCACCCTACAAGGATACAAATCTGAATTGGGGAAACCCTACAATCGGATAACATTTTATCTTTGCACTACTTCAGACTTTCTTGATCACAGCCTCAAAGGTTGTGTTTACACAGATTCTGACAATGATAATGAAACTGAAAAGGATTTTGAGGAACCAAGTGAACCAACACAGTCAAAAATCAGCAAGTTCACTCATCGACTTTTCACACAGGAAGATGAGGAGGCACAAAATAAAGAGCAAGAACAATCTGATGCAGTGTTAGATATACCAGTGTTTTCCACATCTGATCAAATGCCTGGGCCATCTATCAATCACCTTGCCACCAGTGATGCCAAAGACACCCAAATAAAGAACGATGAACAAGTTGCGAGGTCATTACAAGAAGAGTTCAACAGAGAGTCTGACAATGAACCCAGCCAATTTTATTCAACAATAGATGATCAGGCTGGTGTACTGAAAGCACTGGAAGAGAAGGTAATAAGGGAAAAAGACTCCTTGTTCCTTGTGGTAAGAAGAGGTGCACCATTAGATAGAGTTCTTTACCTCTGGCGTAGAGAATCACGCAAAGTCTCTCCTGAAAATGAACTTAGAATCAAATTCCTTGGAGAGGATGGGATAGATTCCGGTGCATTGACCAAGGAGTTTCTCACCTTGACAGTTACAGACATTGGGAAAAAGTTGTTTCCCAATGGCAGCCCTGTACACTCAACAAATGATGTCCACAATGGAAATTTTAAAGCATGTGGAGAAATAGTGGCAACAAGCTTAGCCCAAGGAGGGCCGCCACCATGCTTTTTAGCAGAATGTGTCTATAATACTTTGGTACTGGAAAGTGACATTGACTTCACAAGTGTCAGTCCTGAACAACACCTGACTTCGACTGAACAGGAACTACTTCACCAAATACAAAGGAATGTCATTGATTATCAAGATGCTATCATAGAACATGGGTACACAGGGGTGATCAATGAAGCAAATGTGGACTCCATCACTGCCGCAATTGTTGTCAGTATGTTGAGCAGGAGAACCCTTTGCCTCAAGGAATTCAAAAAAGGGTTGCAGTGTTATGGGTTGTCAGGTGTTATTTCCAGATATCCACACCTTACTCGAGGTCTGTTTGTTATGGGACAGCAGCAAAAGGTGGATGCTAACTACCTCTTGTCCTTGATGACACCTGAATTATCTCCAGAAGGGTCCTCACGGCGACAGAAAGAAGACGAAATAATGGACCATTTTCAAGACTTTCTGATTAGCCTCGATGACGAGGTCATAACAGGCTATACAGAAGCTATAGCCTTTGATATGGGTAATGATTTAAATGTTGTAAATGTAGATCAATGCACCCCTGATGATCAGGAGATGGCTACCTTTAGCACCCCAGATCTAACACCAGCAGGAGTCCTTGGTTGGCTAACAGGACAGAAACATAGGGAGATTAGGAAAACAGACCTTGGAATAACTGTAAAGTTTGACCATCAATGTCTGATGCGTAACCCTGAACACAGGCTATGCTTCCCTTCTGTGGGGGCCTGTGGGCGCACAATTACTTTTCCTGTTTCCCACATGGGAGGCTTTGACCAATTTAAAGAAATCTTCCTCTTAGCTTTCTGCAAAGGCCAAACATTTGCCATGAGCTAA

Transcript

BRAKERTYJT00000048010

Protein

Gene family

Family type	Membership / link
Ubiquitin family	E3\|E3 activity\|HECT · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13240 all species →	zinc_ribbon_2	zinc-ribbon domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035983 all species →	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR000569 all species →	Domain	HECT domain	Interproscan
IPR026870 all species →	Domain	Zinc-ribbon domain	Interproscan

PANTHER

No PANTHER signature was detected for BRAKERTYJP00000048010.1. This gene does have a gene model — the search simply returned no hit.

Gene Ontology

GO term	Category	Description	Source
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22371	G2H3; G2/M phase-specific E3 ubiquitin-protein ligase	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.