Gene detail

Detailed information of BRAKERTYJP00000049611.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17144 all species →	Ribosomal_L5e	Ribosomal large subunit proteins 60S L5, and 50S L18	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005485 all species →	Family	Large ribosomal subunit protein uL18 eukaryotic/archaeal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23410 all species →	RIBOSOMAL PROTEIN L5-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000027 all species →	Biological Process	ribosomal large subunit assembly	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0008097 all species →	Molecular Function	5S rRNA binding	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02881	RP-L18, MRPL18, rplR; large subunit ribosomal protein L18	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.