Gene detail

Detailed information of BRAKERTYJP00000050242.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09230 all species →	DFF40	DNA fragmentation factor 40 kDa	Domain	Interproscan
PF02017 all species →	CIDE-N	CIDE-N domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015311 all species →	Domain	DNA fragmentation factor 40, C-terminal	Interproscan
IPR003508 all species →	Domain	CIDE-N domain	Interproscan
IPR044925 all species →	Homologous_superfamily	His-Me finger superfamily	Interproscan
IPR039729 all species →	Family	DNA fragmentation factor 40	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13067 all species →	CASPASE-ACTIVATED DNASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006309 all species →	Biological Process	apoptotic DNA fragmentation	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0006915 all species →	Biological Process	apoptotic process	Interproscan
GO:0004520 all species →	Molecular Function	DNA endonuclease activity	Interproscan
GO:0004536 all species →	Molecular Function	DNA nuclease activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02311	DFFB, DFF40; DNA fragmentation factor, 40 kD, beta subunit	EC:3.-.-.-	Apoptosis	ko04210	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.