Gene detail

Detailed information of BRAKERTYJP00000051729.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000051729

atgaatcagaTGTCACTGGCAACACAAAAGACGTTAATACTGTTCCTAGGATTTGTGTTTTCTGTGAAAGAAAAGCCTGAATTGCGGCTCCCAGGTCCTGTTGTAACAGCACTGTCAAGTTTCTGGCTGTGGTGTTCAGCCAAAGGAACTCCTCCTATACACATAACGATAACGAAAAACGATAGACAACTGGTTGAAAGCACTGGAATCGCCAAGATCCGTGTTTACGATGAGGGCACATACAGCTGCAATGCAAGTAATACGGCTGGAACTGATTCCAAAGAAACACAAGTCACTTTTAACACAAATTGCGACAGTCAGTGCACTGGTTTTGGTCGCCCTTTAGGCGACGATGAGACGTTTGCGGCGAATGACTTTCATTGTATGCATTCATCTCCCGAAGACATCTTCAAGTGTGCACCTACAATTACCACAGACATAGATCTTGGGTGGAATGAAATACGCCAGATCCCCTCAGATGTATTTTTTGATCTTGAGGAACTCCGAGAATTATACCTCACAACGAATAAAATAAGTGATCTTCCTTCAAGTATTTTTGGGACACTAGCTAGCTTGCAGATCCTAGATGTTACCAGAAACAATATTAAGGAACTTTACCATGAGACATTCCAGAATCTGTTCTTACTTGTTCGGCTTAGTTTACAAAGAAATGAGATTGCGAGTCTACCTGCCGGTATCTTTGACAGTTTAAAGTCCCTGACGCATCTTGATTTGGGCTCGAACAAGATACACAGGTTGCAGTACGGAATCTTCAACAATCTGAAAAAACTAAGAGAACTAGATTTGTCAGATAACAAAATCAAGGTGTTACCAGGCGGTATATTTCAAGGACCACAGCTAATGAAGGAATTGTTTCTTTTAAACAACAAGATTAGAAACATCGCAAAGGACAGTTTCAAGAATCTTAAAGAACTAAGGAGGCTTGAGGTAGGCAAGAATCAGCTACAGGAAATTGCTGCCAACGCCTTGAGTAACCTCACATCCTTGATAACTCTAGCATTAAACAGAAATAATATCAGCTCTATAACAAATGAAACGTTTGCCAACCTTATAGATCTCGAGTTTTTGTTActgaatgataatcgcatcacTAAGATTCCCGACAAAGCCTTTTTAAATCTTCAAAAGCTGAGACTTCTCATGCTTTCTGATAACAAAATAAGTGATGTTGGATCTAAGGCGTTCATAATAAGCAAGTTCGGCACGAGGATATACATGATACGCACTGCTCTAAGATCATTGGATTTAGAGTCAATAGATGGTCTGGATGGTTTAACTACCAAAGTAAGTATGAGTGATGGACAAATCGGTTCAATGGCGTTTAAGGACAAGAATGATTCTGTACGCTGTAGGATACAACTTGGAGTTGGAAACAGCGAAGAGGAATATATCGAACTGGATATGAACTCGTTGTTCGATGCCTTACGCCGAGCGCTACTACAATCCGGATTTGCAAAGGTGTCAACAACGGAAAACGCATACAGATATTTTCCATGTCCCGCTGGTACATTCGTCAATTCATCAAATACAGAGCGACCAGATTGTGAAATGTGTCCTCCAGGAGGTTATTTTTCGGACTCCCTAGCATTCGTTAGTGATGGTTGTAGAAAGTGTCCAAATGGCACGTTTGTTTCCCTATATGATCAACCAGGAACACACGCATTAAATTGTACAGCATGTCCTCAAGGAACAGACACCGACGCGTTCGCTGGATTTCGCGCATGCAAATGTCTGGAAGGCTTTCATCGCACGCATATGTTTAAGGGTTGTCAGCCATGTGATAAAGATGGACTACAGTGTGTAAATGACTACCTCACTCTTAAGCCAGGTTATTGGTGGAAATGGTATAATGATGTCTACAAGGGCTACTATCGTAACTTTACCTTGAATCTTCTTTCATCAAATCCTTCGTTTGACAGCTATGGGGTTGAATACTCATTCGCAATGCCTTTACCCCATGAATGCCCAAGAAAAGAATCGTGCCTAGGTGGCTTGGATTCTAAGTGTGATGATGGCTATGAAGGACCCCTCTGCGAGGTTTGCAGCCATAGGTACTACAAGCGGCTTCAGGCGTGCAAGAAGTGTCCATCGAATGCTTGGATGGCTGGGCAGTTAACCATCACCACTGTTCTATTATTGTTACTTTTTGTAATCGTTGTTTGGACAAGTGTTAAGAAAAACAAGGAAAGTAGACGGCGTCCTTTGGTGGACATCATTCTGGCTAGGCTGAAAATCATTATTGGATTTTATCAGGTTACGTTTGGATTGCTGGATGCTTTCTCCTTCATAAAGTGGCCAGATTCCCTGTCGGCCATAGCAAAGTATTCTGAAATGCTTCAACTGAATGTTCTCCAGATTGCTCCCATTCATTGTCTCTTTCCAGAACTGAAAGTGGATGCATTCGGAAGTCTGTTTGCCATCCTTGCGATGAACGGTGCAGCCATTGCATTTGCAACAGTAGCATATGGAGTTAGACGGTTTATGGTCTTACGAAATCGCCAGCTGGAAGATGAACAGAAAGCCAAGCAAATTTCCCAGAGCAAGGAACTTATCTACAGAAACctgtttttctttctgtttGTCACTTATCTTAGCACCTGCTCTAAGACTGCAAACGTTCTCCCCCTTGCCTGCCGCCAGATTTGTCATGAAGATACAGGTGACATTTGCTTCAAATATCTTAAAGTTGACTTTACTGTTGAGTGCAATAGCCCAAGATACAAACGTCTGGTTGTGGTAGCGTATTGTGCAATCGCCTACATCATTTTCTTGCCATTTGCttcctttcttttcctttgGAGACAACACAGAAAAATAAAAGCAAGGGAAAACGACTCAAGGCAAAATCAAAACCTTAACAAAGAACTAGCAGCAGGGTTGCGATTTCTTTCTGAAAATTATACTGCCAGATCGTGGTACTGGGAACTTGTTGAGACAGTCCGCAAGGTGATACTGACATCTGGCTTGATTCTTGTGGGAGGGGAGAGCAGGGCTTATGTTGGCTTGGCTTGTGTAGTTTCAGGGCTCTATGGAATGTTCTTTGCCTACATGAGACCAGTTGAAGACCCATTCGAAAACAAACTGATGCTCATATCCCTTGCTGTTACATTTGTCAATTTGGGTATTGGCGCTGTCAGCAAAATCCCGAAAGAAAATGTCCCAGCGTCTATTGACCCTTACGTGGACTCTGTCATGTTCAACGTATTGGTGATTGGAGCAAATACTCTGGTTATCGGATTACTTGTTGGTGAGTACAGATTCTGA

Transcript

BRAKERTYJT00000051729

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13895 all species →	Ig_2	Immunoglobulin domain	Domain	Interproscan
PF13306 all species →	LRR_5	BspA type Leucine rich repeat region (6 copies)	Repeat	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR050328 all species →	Family	Multifunctional Developmental and Immune Receptor	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR026906 all species →	Repeat	BspA-type LRR region	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24373 all species →	SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05679	ABCG1; ATP-binding cassette, subfamily G (WHITE), member 1	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.