Detailed information of BRAKERTYJP00000052228.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Transcription factor familyCSD · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00313
all species →
CSD'Cold-shock' DNA-binding domainDomainInterproscan
PF13927
all species →
Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002059
all species →
DomainCold-shock protein, DNA-bindingInterproscan
IPR003599
all species →
DomainImmunoglobulin subtypeInterproscan
IPR012340
all species →
Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR003598
all species →
DomainImmunoglobulin subtype 2Interproscan
IPR007110
all species →
DomainImmunoglobulin-like domainInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR050181
all species →
FamilyCold shock domain-containing proteinInterproscan
IPR011129
all species →
DomainCold shock domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11544
all species →
COLD SHOCK DOMAIN CONTAINING PROTEINSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0010468
all species →
Biological Processregulation of gene expressionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERTYJP00000052228.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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