Gene detail

Detailed information of BRAKERTYJP00000052423.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00730 all species →	HhH-GPD	HhH-GPD superfamily base excision DNA repair protein	Domain	Interproscan
PF07934 all species →	OGG_N	8-oxoguanine DNA glycosylase, N-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052054 all species →	Family	Oxidative DNA damage repair enzyme	Interproscan
IPR003265 all species →	Domain	HhH-GPD domain	Interproscan
IPR011257 all species →	Homologous_superfamily	DNA glycosylase	Interproscan
IPR012904 all species →	Domain	8-oxoguanine DNA glycosylase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10242 all species →	8-OXOGUANINE DNA GLYCOSYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006285 all species →	Biological Process	base-excision repair, AP site formation	Interproscan
GO:0034039 all species →	Molecular Function	8-oxo-7,8-dihydroguanine DNA N-glycosylase activity	Interproscan
GO:0006284 all species →	Biological Process	base-excision repair	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0003684 all species →	Molecular Function	damaged DNA binding	Interproscan
GO:0006289 all species →	Biological Process	nucleotide-excision repair	Interproscan
GO:0008534 all species →	Molecular Function	oxidized purine nucleobase lesion DNA N-glycosylase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERTYJP00000052423.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.