Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families
| CDS |
| BRAKERTYJT00000052721 |
| Transcript |
| BRAKERTYJT00000052721 |
| Protein |
| BRAKERTYJP00000052721.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00773 all species → | RNB | RNB domain | Domain | Interproscan |
| PF13086 all species → | AAA_11 | AAA domain | Domain | Interproscan |
| PF13087 all species → | AAA_12 | AAA domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR047187 all species → | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
| IPR022966 all species → | Conserved_site | Ribonuclease II/R, conserved site | Interproscan |
| IPR012340 all species → | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR000571 all species → | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR019734 all species → | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR001900 all species → | Domain | Ribonuclease II/R | Interproscan |
| IPR011990 all species → | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR041677 all species → | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
| IPR041679 all species → | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
| IPR050534 all species → | Family | Coronaviruses polyprotein 1ab | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43788 all species → | DNA2/NAM7 HELICASE FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0046872 all species → | Molecular Function | metal ion binding | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0004540 all species → | Molecular Function | RNA nuclease activity | Interproscan |
| GO:0004386 all species → | Molecular Function | helicase activity | Interproscan |
| GO:0043139 all species → | Molecular Function | 5'-3' DNA helicase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K25165 | HELZ2; 3'-5' exoribonuclease HELZ2 | EC:3.1.13.1 EC:5.6.2.6 | Messenger RNA biogenesis | ko03019 | deepkoala |