Gene detail

Detailed information of BRAKERTYJP00000054343.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000054343

ATGGCGTCGGACGACGAGGATGTTCCTGATTCTGGGGCCGTGTTTACGTTTGGCAAAAGCCGTTTCTTGGACAACAAATTTTGGATTCGCGATGATGCGGTTATCCATGTCGCTTGTGGAGACGAGCATTCTGCTGTAGTTACAGAAAATGGAAAGCTATACACATTTGGAAGCAACAACTGGGGACAGCTCGGCCACGGAAACACAGCTCAATTTCCGAATCCAAAGCTAGTCAAACGCCTAAAACCTGAGAAAGTGAAACTGGTAGCTGCTGGCAGGAATCACACCATTGTGTCAACTGAATCAGGAAAACTTTTCAGTTTTGGTTGTGGAGGTGATGGACAATTGGGACATGGAGATTGTGAGGATTTGAATTTCCCTAAAGCAATAGAATCCTTACAAGATCAGCAGTACAAAATGCTTGCGTGCGGATCAGATTTCACTGCAGCAGTTACTGTTAAAGGACAACTGTACACTTGGGGATCCAGCAGCGATGGTCAAACAGGGCAAGGAGATGAGGACCGTGTTGTACCCACCATGGTACAGTTGAGGGGCAAGGTAACAGCAGTAGCCTGTGGGTATTACCACATGGCTGTAGCCACTGATGATGGAACTTTGTACATGTGTGGAGAAAGGAATGATAGCGGTAAACTAGGACTTGATGAATCGCAACTCAGCGACACATCACAGCTTCAAAAGCTTTTCATAAATGAGCAGGTCTCTGCTGTGGCATGTGGCGGCAATCATACTGCAGTCGTGACAGCTAGTGGAAAATTATTTACTTTTGGCGAAGGGGAGCATGGCCAACTTGGGCATGGGTCCTCATTGTTAAAATGCCCTACTCCTAAACAAGTGAGCAGGCTAGGAAACATTCATGTTAAATATGTAGCCTGTGGTGAAGCTCATACGGCGATTATAACAAAACATGGAAAACTGTATACTTGTGGAGATGGCCGACATGGCAAGCTCGGAATGGGAGAGGAGTCATCTTCCAATCTATTCAACCTTGAAAAAGTGACCAGATTTGATGCTTTTACCGTGGGAACAGTTGCGTGCGGAGGATGTCATACACTTGTTACTGCAGTTAAGAGATGTGAGATCAACAACAGTACGGACAGTGAAGCTGAAGCTGAAAAGGATGTTCTTGCAGCTTCAGTTTCCTCCACGAAGAGTCTTCAGGATGCTGTGGATGGGCCGTCAGGTTACAGGGCTGGGCTTGCATCCACCCTTCCTGCCGGAGGTGCAGCAAGGAACAAACGCCGGCAAAGAAACATAGAGAGCCTTGGTAACTCAGTAGGCGGGACCTTGCCTCCCGTCAGCAAGTCCACTTTACCGCCCCTGTCTCGGACTCTTCCTGCACTGAAAAAGGAGCCATCAAACCAGGAAAAGATACCCGTTAATCCTCTGAACATGTCTACGTTGCCTAAAATAACACATGGAGACCAAGGAGGTGACGAAAGAAAAGATGAAGTTAACAAAGATAAAAAAACAGctgataaaaaggaaacaaagGTCACTAAGCCAAGTAAAAAACCAAAGGATGCTGAGAGCTCTTCCGGTATATCGGAGAGTGAAGAGGAGGATGaggacgatgatgatgacgctGAGCAAGatatgaaaaagacagaaaaaaCAGCAGTTACTAAAGTGGAACAGAAAAAGGACTCGGAGGAGTCCATGACTGAAGACGAGAGTGACAGTGAAGAGGAAGAGTCCACGGGAAGAAATAAAACAGCAGAATCAAACAAGCCTGGTAAAGCAACTGCAACTGTCACCGAAAAAGACAAGAATAAAGATAAAGTTCCTTCTAAGAAAAAAGAGgacgaagaagaagaggaggaggaggaatcGGGAGAAGGTGACGAAGAAAGTGATGAAGAAGAGGACAATGAAGAGAGTGCTGAGGAAGGAGAGAAACCTGCCAAAAAACTTGAAGTTGTTGGTAGAAAAGTTGATGTAACAGAGGccgagaagaagaagaaagacgaAGATGAGGAGTCAGAAGAAGAGGAAAGTGACGAGGACGAGGATGAGGATGAAGAAGATGAGGCgagcaaaaagaagaaacaacagAAAGAATCTGGAAAAAAATCTGAAGCCAAAGAGAAAGGCAAAAGAACAGATTcaaataagaaaaaagaaacggAAGAGGAAAGTGAAGAAGACGAAGATGATGACGAGGAAGAAGGAGAAAGTGAGGCAGATAAAGAAACAAAGAATGCGGAGAAAGataaaaagaagaaaactgagaagaagaaaagtaaaaaagagAAAACCGAAGACGAGGAAGATGAGGAAGACCCTGACAAGAAGAAAACTGATgctaaaaaagataaaaagcaGGACAAGAAAGGAAAGAATAAAGATGATGAGAGtgaggaggaggaggatgaCAAAGCGGACAAAGATGACGAGGACAAAGCAGATAAAGGAGGGGAAATCAGTAAagacaaaaaagacaaaaaagaagACGGATCCGGAAAACCAGAGGctgggaaaaaagaaaaaaaatctggcATATGTGTCCTTTTATAA

Transcript

BRAKERTYJT00000054343

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00415 all species →	RCC1	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000408 all species →	Repeat	Regulator of chromosome condensation, RCC1	Interproscan
IPR009091 all species →	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR051210 all species →	Family	Ubiquitin ligases and GEF domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22870 all species →	REGULATOR OF CHROMOSOME CONDENSATION	Interproscan

Gene Ontology

No Gene Ontology signature was detected for BRAKERTYJP00000054343.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19607	RPGR; X-linked retinitis pigmentosa GTPase regulator	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.