Gene detail

Detailed information of BRAKERTYJP00000056518.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation CGRAC2 · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000056518

ATGTTTGAGATGCGTCAAGCTGCTTTGAAAGAATTTGCGAGGGAATTTGTCATTCTGAATGAGGGGAGAGATTCTGATAGATTGGAAGGCGAACAAAGATTTGGGGAAGGATTTGATGGAACTCCGCGAGATATGTTTGAAATCGTCCAGAAAGATGTGGAAAAGTTGCTGCAGAAGAATAAGCGAAATAAAGTCAAGTTTGTTCTGAAATGTCTGATGTTGAAGCCGAATATGGCAACAGGCGAAACTGACTTTATGAGTGCCCAGTTTCATTCCGAAGTTGAAACTATTCTGGAAGGAACCAATGTAAGAAGATTGTATGAGCGCATGGTTGAAAGAATTCAAGAGAATTTCGCTAATTTCCTGAGAAGAGGCAGCAACTGGCAGTTCGCGCAATTTGAAgaactttcaattttctttgTAAGATATCGCCCCTTGAGAGGTCGAGGATGGTTTCAGCTTCCTAAGACACTTAGAAATAAGAAGGTAATTTGCAATGTGAAGAACAGGGATGAGCTATGCTTCAAGTATTGTTTGTCTCGAGCTTTCAATCCAGTTGAAAAGAGAGAAGAAGAAGTAACAGATATCTTGAAAATTCAAAGTGCAAAGTTTGATTGGAGCGGGTTGAAATTTCCTGTGAAACTTGACGATATCGGCATATTTGAAAGAAACAATCCAGGTATAGCTATCTGGGTCTTCGGTTGGGAAAATAATCAAGTTGTGCCATTGCGCAAGTCTGAAGTAACTGGAGGAATTCCAGTTGATTTGATGCTGCTGCATAAAGTACCAAAGTTGAAAGAAGGAGAAGAGCGAAAGTTGGGAGAAGAGTTGCAGCCTCAAACTCATTATTGCCTGATAAAGAAGCTTAATTCTTTAGTGCATGTTCAAGTGACTAAACACAAGGAAAGTGTGCATTTATGCCGGAGATGTTTGAATTTCTTCGGATCTGCTAAGAAACTGGATTTGCATGAAAGAGCTTGCTCCCAGAAGGAGGGAGTGAGAATAGATATGCCGAAAGAAGGAAGTGTCGTGAAATGGAAGAATTTTCAAGGAAAGCAAAAGCACCCATTTGCAatttacgctgattttgagGCGAGATTGGTTCCGATTGAAAGACAGAAGCAGAATGAAAAGTTGCCATACACAGAAAAGTTTCAGAAACACATTCCAGTTTCTTTTGCCTTCCATCTGGTGAGTGATATTGTCCAAAGAGAACCAGTTATCTTTCGAGCTGAAACGGATGAAGAAGATGTGGGAGATAGATTTGTGCAAGATTTGATTGAAACTATCCAAAGCATTCAAGAAGAAGTAAAATTTTCCAAGAAGACGATTTTCAGAGAGAAAGATCGTAAAAAGTTTGAAGCAGCAACAAGTTGTTGGTTATGCGAAGAAAAATTTGAAGAAGAGGACAAGATTGTCAGAGATCATTGCCATTTCACGgggaaattcagaggagcaACGCATGAAAATTGCAATCTTCAGTGTAgaaagccaaaattcaccccaGTGTTCTTTCATAACTTGAAAAATTATGACGCGCATTTCATAGTGAGAGCATTGGGAAAGATTCCTGGAGAGATAAAGTGTTTGCCGAATAGTGAAGAAAAGTTCATTTCGTTCTCCAAGATGATTGAATTGGGGAGATGGCAAGATAAGCATGGAAAAGTCAGAATTGACTGGCACGAAATCAGGTTTCTTGATTCGTTTGGATTTATGTTAGACTCATTGGGAAGATTAGTGGGAAATTTGACCGATGACGATTTGATTGAAACAAAAAAGATTTTTGGGAAAGATTGGAAATTAGCCAAGCAGAAAGGTATATTTCCATATGAGTGGCTAGATTCTGTGAGAAAGTTTGAAGAACCAAGTTTGCCGAGGAAAGATGCATTTTTCTCCCAGTTGACAGGAGAAGGAGTGGAAGAGAAAGATCTGGAACATGCAAGGAGAGtctggaagaaaaagaaaatgcgaaatatgggagattATCACGATTTCTATCTCCTGACAGATGTGTGTTTACTGGCTGATGTGTTTGAAGCATTcaggaaagtttgcagagataaTTATAGCTTAGATCCAACTTGGTTTTATACATCGCCTGGGTTAGCTTGGAATGCTGCCTTGAAGAAGGGATCAGTAGTTAAGTATGGAGAGAAAAGAAGAGTGGAGTTAGAGTTATTGACAGATGCCGATATGCTGCTATTTTTCGAGAATGGAGTtcgtggaggagtttccacTATATTTCATAGAAGAGCACAAGCGAATAATAAGTATATGGGAAAAGAGTTTGACCTAGAGAAACCTTTCAAGTTCATTCCATATTGGGATGCAAATAGCTTGTATGGATGGGCTATGACAAAGCCATTGCCAGTAGGAGAATTTGAGTGGATGACAGAGGAAGAGTTGGAGAGATGGGAAGAAATTCCCTGCGTGGTTGAAGTGGATGTGGATGTGCCGGAAAAGTTGCATGACAAGTTCAATGATTTTCCACCCCTGCCAGAACGCGTTTGGATGAATGGGGTGGAAAAGCTGATTCCAAATTTATGGAACAAGAGAGGCATGATAGTACATTATAGTTTGTTGAAACAAGCACTGAAACTGGGATGCGAGTTGAAGAAAGTGACAAGAGGAGTTAAGTTCAAAGAAGAGTGTTGGATGAAAGATTTCATTGAACAAAATGCCGAATTGCGAAAAGCAAGTGAGAATGAATTTGAGAAAAAtttcttcaagctcatgaacaacaCAGTCTATGGGAAAACCATAGAGAACATAAGGAAAAGGCGAGATATCCAGTTAGTGAACAACACAGCGAAAGGAGAAAAGTTAGCCGCTAAACCAAATTATGAGCACACAACTATCTTCGATAAAGATCTGGTTGCGATTCATATGCGAAGAATTAAGATGTTTTTCGATAAGCCAGTTTATGTGGGACAGGCGATTTTAGACATTTCGAAAACATTGATATATGACTTTCACTATAATTATGTTATGAAGAAGTGGGACAAAGCGCAGTTATGCTTCTCAGATACTGATTCCCTGTTGTATGAGATTGAAACAGAAGATTTGTTTGAAGATATAGCAGGAGATGTTAAAGAGCAATTTGACACATCAGGTTTTGGAAAAGATCACCCCAAAGTCGCAGATGGCTCAATTCAATTAGTGAATGAAAAAGAACTGGGATATATGACAGATGAAACAAATGGGGAACAAATTGTGGATTTTGCAGCGTTGCGAGCAAAGTGCTATTCGATCAAGATGTGGAAAGGAgaagaaacaaagaaatgtaaagggATTGTGAAGcaagttgtgaaaaagcaaATAACACATCAAGATTATGTGAATTGTCTGGAAGATAAAGAGCCACAGATGCGGGCAATGAATTGTCTGAGGAGTGAAAAGCATGAAATATCCACGCTGACAGTCAACAAAACAGCTTTGAGTGCAAATGATGACAAGCGATTTGTGCGAGCAGATGGCGTGAGCACTTGGGCATGGGGACATTGGAGAGTAAAGCAAAATGTTGtgaaagaagaagaaatggagaAAAGTGAAGAACAAGTAAAAGCTGATTTGTTTGAGAAGAAAAAGAACCAAATTGTGCGACTTATGAAGAGGAAAGAGAAAGCTGGAATAGCTGTGGAAATGCTCCAGTTGAAAGTAAAATATCATGTTGATGAAAAGATGCTGGAGAAGATGAATGTGAAATGCTGCGGATTTTATGCATACTTGGATGTGTGA

Transcript

BRAKERTYJT00000056518

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02945 all species →	Endonuclease_7	Recombination endonuclease VII	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044925 all species →	Homologous_superfamily	His-Me finger superfamily	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR038563 all species →	Homologous_superfamily	Recombination endonuclease VII superfamily	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR023211 all species →	Homologous_superfamily	DNA polymerase, palm domain superfamily	Interproscan
IPR004211 all species →	Family	Recombination endonuclease VII	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31511 all species →	PROTEIN CBG23764	Interproscan

Gene Ontology

No Gene Ontology signature was detected for BRAKERTYJP00000056518.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERTYJP00000056518.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.