Detailed information of BRAKERTYJP00000056535.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation CGRAC2 · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity|HECT · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00632
all species →
HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00658
all species →
PABPPoly-adenylate binding protein, unique domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035983
all species →
Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR036053
all species →
Homologous_superfamilyPABC (PABP) domainInterproscan
IPR002004
all species →
DomainPolyadenylate-binding protein/Hyperplastic disc proteinInterproscan
IPR000569
all species →
DomainHECT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46276
all species →
E3 UBIQUITIN-PROTEIN LIGASE UBR5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →
Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0000209
all species →
Biological Processprotein polyubiquitinationInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0034450
all species →
Molecular Functionubiquitin-ubiquitin ligase activityInterproscan
GO:0090263
all species →
Biological Processpositive regulation of canonical Wnt signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERTYJP00000056535.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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