Gene detail

Detailed information of BRAKERTYJP00000057109.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000057109

ATGTTTTGGATCTTTTCCGGGATCAAGTCAAGCGCTTTTCTAACAACTACGGCATTAACAAGAGCTTTACACTGTCGCAGACTCATATCAACTCAAATTGGTGCAATTATGAAGGTTTACAGCGACCGAGGGAACCCGATGTTGCTTCGAATTCTAGCGGCAAAAAATCTAGCAGGCGTTCCATTACCGGTACAGTACATCAATTATGAAGACAAAAGCAAATTTAATTTACCTGGACACAGTAAGCTTCCTGTGCTTGAAACTGAGAGTGGAAATTTACTTAACAGTGCAAACAGCATTTGCAGATACCTTCTTGAATTGAACAAAATCTCAACAAAAGATCCTGATCCTGATAAAGAAGCTGTAGTTGATCAGTGGGTTGAGTGGGAGAGTGTAGCATTACAGCCTGTTCTATTTCCCCATCTTGTGTTGTCCATTGGCCTGGATAGAAAAGACAGTGAACATATTGAGGATTTGACAAATCTGCTGAGACATGCAGATGAAGCTTTGTCTTCGCATAAGTTTTTCTCTGGGGCTGAACTTGGATTAGCTGATGTTGTTCTCTGGGGCTCTCTTCATCCTTTGTTTCTTGGGGAGTCTAACTTATGTGgCTCTCAGATCACCAGATGGCATGGTTATCTAATGActcaggatgttttccgcaGAACTGAATCTGAAGTAACAGGAAATAAAGGGATCACGGCATTCAAGGAATCCCTGTTGGCAATGTCTGGAAATCAAACTGCTCCAATCTCAAAACCCCAGGAAACCAGTAAAGCCAAGCAAAGTACAAAAGGTTCACAGCCATCTCAAAAAGAAAACAGTGATGACATTCCACTAGAAGAGGCCAGTCAACCTAAAGTCTGCTCAAAGGAGGAGATAGATGAAGCTTTTAAAAGTTGGAATAATGGTAGCAAGAACCGCCCTAAGACTCGCCGACTTGCTGACCCAGTTCTTCCCTTGGAAGGAGAAAAGAACATTCTGATCACGAGCGCCTTGCCCTATGTGAATAATGTACCTCATTTGGGAAACATCATTGGTTGTGTACTTAGCGCTGATGTATTTGCCAGGTATTGTCGTCTCCGCCAATATAACATACTATACATTTGTGGGACAGATGAATACGGTACTGCTACTGAAACCAAGGCGTTAGAAGAAGGCCTCACACCACAGCAGATCTGTGACAAGTACTTTAAGCTGCACAAGGAAGTCTATGAAtggtttaaaataaagttcGATTACTTTGGAAGGAcgacaacaaaacaacaaactgAAATCGCGCAGGATATTTTCTGGCGGCTTCACAAGCAAGACCACTTAGTGGAGGACACGCTGGAACAGCTCCAATGTGTTGAGTGCAAAAGATTTCTCGCTGATCGTTTTGTGGAAGGCACCTGTCCTTTATGTAACTACGAGgATGCCAGAGGGGACCAGTGTGATTCCTGTGGGAAGCTTATCAACGCCATTGAACTTAAGAAACCTCGCTGTAAAGTTTGTGGAGGAACACCAAAAGTGAGAAGTAGCAAGCACTTGTTCTTGAATTTGGCCAAGCTTGAATCGTCTCTGCAAAGCTGGGTGGAGGAGTCGTCTaccgaagGGACATGGACGTCGAACGCGCGCCATATTACCCGCGGATGGATCCAAGAGGGCCTCAGACCGCGCTGCATTACACGTGACTTGAAATGGGGCACCCCAGTCCCTTTGGAAGGATACACGGACAAAGTGTTTTACGTGTGGTTTGACGCACCCATAGGTTACCTTTCCATCACTGCTAACTACACAAACGAGTGGGAGAAATGGTGGAAAAACCCTCAACAGGTCACTCTTCATCAGTTCATGGCAAAGGACAATGTCCCTTTTCACACTGTTGTGTTTCCCTGCACTCTGATCGGCGCAGACGACAATTACACTCTTCTGAACTCCATCAGTGCAACAGAATACCTGAATTACGAAGATgacaaattttcaaaaagtCGTGGAGTGGGGGTGTTTGGTGATGACGCTGCCGACACTGGTATCCCAGCAGACATCTGGAGATTCTACCTGCTTTTCATGAGACCTGAGAACCAGGACAGCGCTTTTAGCTGGAATGATTTTATCTCAAGGAATAACAGTGAGTTACTCAACAACTTTGGAAACTTTATCAACCGaGCATTGATGTTTGTGCACAACAACTTTGGAGGCATTATACCAGCGATGGACCTAACTGAAGACGACAAGAATTTCATAGCACTCATCAATAAAGAGATCAAGTCGTACATCGACAATAATGAGAGAATGAGGATGCGTGAAGCCTTGAAGGATGTGTTGAACATGTCCAAGCTTGatgatggcGGTGATGCTAATGACGatggcgatgatgatgatgacgtcgttgttgatgatgatgacgtcgttgttgttgatgatgatgatgatgatgatgattacggcgatgttattgttgttgttgatgataatgatgatggaAATAATGACTATgatgttattgttgttgatgatgacgAAGATAATGGCAGTGACGATGATGGTGCTGATAAtaatgttgatgatgatgatgatgatgatcataaTGATGATGTAACAGGATTAGTTCGCTCGCTCTCGACTATGAGAATCTATTAG

Transcript

BRAKERTYJT00000057109

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09334 all species →	tRNA-synt_1g	tRNA synthetases class I (M)	Family	Interproscan
PF18485 all species →	GST_N_5	Glutathione S-transferase, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004045 all species →	Domain	Glutathione S-transferase, N-terminal	Interproscan
IPR033911 all species →	Domain	Methioninyl-tRNA synthetase core domain	Interproscan
IPR014758 all species →	Family	Methionyl-tRNA synthetase	Interproscan
IPR009080 all species →	Homologous_superfamily	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	Interproscan
IPR029038 all species →	Homologous_superfamily	Methionyl-tRNA synthetase, Zn-domain	Interproscan
IPR015413 all species →	Domain	Methionyl/Leucyl tRNA synthetase	Interproscan
IPR001412 all species →	Conserved_site	Aminoacyl-tRNA synthetase, class I, conserved site	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR023458 all species →	Family	Methionine-tRNA ligase, type 1	Interproscan
IPR010987 all species →	Domain	Glutathione S-transferase, C-terminal-like	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR041598 all species →	Domain	Methionine--tRNA ligase, N-terminal	Interproscan
IPR036282 all species →	Homologous_superfamily	Glutathione S-transferase, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45765 all species →	METHIONINE--TRNA LIGASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004825 all species →	Molecular Function	methionine-tRNA ligase activity	Interproscan
GO:0006431 all species →	Biological Process	methionyl-tRNA aminoacylation	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004812 all species →	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418 all species →	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0017101 all species →	Cellular Component	aminoacyl-tRNA synthetase multienzyme complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERTYJP00000057109.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.