Gene detail

Detailed information of BRAKERTYJP00000058060.1 in Cladopsammia gracilis

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Cladopsammia gracilis · all data for this species · gene families

Sequence

CDS

BRAKERTYJT00000058060

ATGGCTCAACAGCAGAAACAAGCAGGCTGCTTTAATTTTCGAAAGAGGCGCGACAAACGTGTTGAGCCTGATGGAGCACAGATACGAGACGAACAAAACGGACCGGCACCGCCAGACGAATTGCAGCCGCAGCCGGCGAATTCAGACAGTGGCTCAAGATCAAGACTGGGCGAGAGTTTGGAAGGACGAGTCAATGTACTTTCTGACGAAGATTTCCAAAACAGAAATGATGCGCTGAGAATTGACCCAGACACAGACGATACAGCAACCAAGTTAAAAACCAAGGCTCTTGATTTCCATAATCAAGAGAACAGAAAAGCACACAGGACAGATGAATACGAGATACAAGAACTTATTATCAGGAGGGGACAGGCTTTTGATATCACAGTAACGTTTAACAGGGACTACAATCCAGAGTATGACGTCATTGTTGTACAGTTTGTTACAGGCAAACGGCCTCAGGAAAGCAAAGGATCACTCGTGCGAGTCTCAATCCAAGACACACGCACCCCTACTAAGTGGGGAATGCAAGTGAAGAAAGCCAATGGCAATACCCTCTGCCTGTCAATTACGTCTGCAGCAAAAGCCATTGTCGGTCCTTATCAGGTACTGATAGAAACGAaaagcaaagattcatctggaGAGATATCCATGTCTCGCTACAAACACGACAAAGAAATTTACATCTTGTTCAATGCTTGGTGTTCAGAAGATGCAGTTTATATGGAAAGCGAAGAGCACCGTAACGAATACGTGCTGGAGGAAAATGGCTATATATGGAAAGGTGTTTCCGGGCAATTCCGTACAGTTCCATGGAATTTTGATCAGTTTGAGGACGTTGCTTTAAACTCTGCTCTGTGGCTACTGGATAAAGCTGAACTTTCCAGTATCGCTAGGTCCAGTCCAGTCGAGATCTCGCGAACCATTTCGGCCATGTCAAACTCAAATGACAGGGATGGAGGGGTCCTGTCAGGGCGTTGGTCCAACGACTACCCTAAAGGTACCACTAATCCCTTGACGTGGACCGGAAGTGCTGCTATCCTGGAAGAATtctggaaaacaaaaaaaactgtgcgtTATGGGCAATGCTGGGTGTTCTCTGGAGTTGTGACTACATTGATGAGAGCGCTAGGGATCCCAACCAGAAGCGTGACAAATTTTGACTCAGCCCACGACACAGATGCGAGCATGACAATTGACTACCACTTCGACGATGAGGGAGACATGATAGATGATATGAACGATTCCGTGTGGAATTATCACGTATGGAACGAGTCATGGTTTAAACGTCCTGATTTGCCAGCTGGTCACGACGGATGGCAGGCGTACGATGCCACGCCACAAGAAACCAGTAAAGGTGTTTTCCGTTGTGGTCCGGCATCCGTCAAGGCAATCAAAAATGGAGAAGTGTACCTTCCATACGACACAGGTTTTGTGTTTGCTGAAGTTAACGGTGACCGTGTTTATTGGGATGTCGTGAAAGCAGACGGTTCTATGAAACCTACGAACGTCGACAAGAAATGCATTGGAAATGATGTCAGTACCAAGGCTGTAGGGACAGATTCTAGAGAGGACCTCACCCAAGAATACAAATTTCCTGACGGTTCTGAAGAAGAGAGAAACGCAATACAATTAGCATTCCAGTTCAGTAGTCGTGAAGACCACGAAATATACAAATCTGAGGTCGAGGATGTCAATTTTCGTCTGGAGATGGAAGATACTGTGTATGCGGGCAATAGTTTTGATGTTGCTGTTGTCGTAGAAAACAAGTCAGAAGTAACTAGAGAAATCAAAGTTAACTTCACAGCGGTTTTGAGTTTTTACACTGGTGTTCCCGCCAAAACATTAAAGGGATACAAACTCAAGTTTTTGTTGAACTCACAAGCAGAGAAAAGATTTGTTCTAACGCTTGAACCCAATGACTACATCACATCAAAGACAAGTATTGGTGACTCTTACATCAAATTGTATGTGAAAGGTGTAGTGATGGAAACAGAGCAGTCCTTCGCTACTCAGAAAATTGTGGAGCTCGCACTACCTACGCTAAAGGTTCAGCCATCTTTAACACAAATAAAGGTTGGTGATGATGTGGTAGTGACAGCATTCTTCACGAATCCTTTGCCAATACCCCTCACAAAAGGACAGTTCCACTGGCAAGCTACCGGCATGAAACCGAGGACATTAACTGTCGATTGCAGCGGTCCAGTGGCTGTCAGGGAGGAAACAAGCATGTCTGCCACGTTCAAAGCGGCAAGAAAAGGAAAACATCACATTGCCATTAGTTTCCAGTCTGCCGAACTCAAGGATATTCACGGCCAGTGTACCGTTTCAGATCTCGAGACAGCTTAA

Transcript

BRAKERTYJT00000058060

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00927 all species →	Transglut_C	Transglutaminase family, C-terminal ig like domain	Domain	Interproscan
PF00868 all species →	Transglut_N	Transglutaminase family	Domain	Interproscan
PF01841 all species →	Transglut_core	Transglutaminase-like superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008958 all species →	Domain	Transglutaminase, C-terminal	Interproscan
IPR050779 all species →	Family	Protein-glutamine gamma-glutamyltransferases	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR014756 all species →	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR036238 all species →	Homologous_superfamily	Transglutaminase, C-terminal domain superfamily	Interproscan
IPR001102 all species →	Domain	Transglutaminase, N-terminal	Interproscan
IPR036985 all species →	Homologous_superfamily	Transglutaminase-like superfamily	Interproscan
IPR013808 all species →	Active_site	Transglutaminase, active site	Interproscan
IPR002931 all species →	Domain	Transglutaminase-like	Interproscan
IPR023608 all species →	Family	Protein-glutamine gamma-glutamyltransferase, animal	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11590 all species →	PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003810 all species →	Molecular Function	protein-glutamine gamma-glutamyltransferase activity	Interproscan
GO:0018149 all species →	Biological Process	peptide cross-linking	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05619	TGM1; transglutaminase 1	EC:2.3.2.13	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.