Gene detail

Detailed information of BRAKERXEIP00000012723.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: XP_028390598.1, 40S ribosomal protein S16-like [Dendronephthya gigantea]
Species Muricea muricata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3T0X6	Small ribosomal subunit protein uS9 OS=Bos taurus OX=9913 GN=RPS16 PE=1 SV=3
P62249	Small ribosomal subunit protein uS9 OS=Homo sapiens OX=9606 GN=RPS16 PE=1 SV=2
P14131	Small ribosomal subunit protein uS9 OS=Mus musculus OX=10090 GN=Rps16 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008747 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00380 all species →	Ribosomal_S9	Ribosomal protein S9/S16	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR000754 all species →	Family	Small ribosomal subunit protein uS9	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21569 all species →	RIBOSOMAL PROTEIN S9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000462 all species →	Biological Process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015935 all species →	Cellular Component	small ribosomal subunit	Interproscan
GO:0022627 all species →	Cellular Component	cytosolic small ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERXEIP00000012723.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.