Detailed information of BRAKERXEIP00000016860.1 in Muricea muricata

Genomic Location: :...
NR annotation: MCH9716965.1, hypothetical protein [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8SR75DNA-directed RNA polymerase II subunit RPB2 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=RPB2 PE=3 SV=1
Q54J75DNA-directed RNA polymerase II subunit rpb2 OS=Dictyostelium discoideum OX=44689 GN=polr2b PE=3 SV=1
Q10578DNA-directed RNA polymerase II subunit RPB2 OS=Caenorhabditis elegans OX=6239 GN=rpb-2 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04566RNA_pol_Rpb2_4RNA polymerase Rpb2, domain 4DomainInterproscan
PF00562RNA_pol_Rpb2_6RNA polymerase Rpb2, domain 6DomainInterproscan
PF04565RNA_pol_Rpb2_3RNA polymerase Rpb2, domain 3DomainInterproscan
PF04560RNA_pol_Rpb2_7RNA polymerase Rpb2, domain 7DomainInterproscan
PF04563RNA_pol_Rpb2_1RNA polymerase beta subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014724Homologous_superfamilyRNA polymerase Rpb2, OB-foldInterproscan
IPR007646DomainRNA polymerase Rpb2, domain 4Interproscan
IPR007121Conserved_siteRNA polymerase, beta subunit, conserved siteInterproscan
IPR037033Homologous_superfamilyDNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyInterproscan
IPR007120DomainDNA-directed RNA polymerase, subunit 2, hybrid-binding domainInterproscan
IPR015712FamilyDNA-directed RNA polymerase, subunit 2Interproscan
IPR007645DomainRNA polymerase Rpb2, domain 3Interproscan
IPR007641DomainRNA polymerase Rpb2, domain 7Interproscan
IPR007644DomainRNA polymerase, beta subunit, protrusionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0001055Molecular FunctionRNA polymerase II activityInterproscan
GO:0005665Cellular ComponentRNA polymerase II, core complexInterproscan
GO:0032549Molecular Functionribonucleoside bindingInterproscan

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