Detailed information of BRAKERXEIP00000022257.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB4015297.1, Transcription initiation factor TFIID subunit 5 [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q15542Transcription initiation factor TFIID subunit 5 OS=Homo sapiens OX=9606 GN=TAF5 PE=1 SV=3
Q8C092Transcription initiation factor TFIID subunit 5 OS=Mus musculus OX=10090 GN=Taf5 PE=1 SV=1
Q6S7B0Transcription initiation factor TFIID subunit 5 OS=Arabidopsis thaliana OX=3702 GN=TAF5 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001573 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04494
all species →
TFIID_NTD2WD40 associated region in TFIID subunit, NTD2 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007582
all species →
DomainTFIID subunit TAF5, NTD2 domainInterproscan
IPR037264
all species →
Homologous_superfamilyTFIID subunit TAF5, NTD2 domain superfamilyInterproscan
IPR006594
all species →
Conserved_siteLIS1 homology motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19879
all species →
TRANSCRIPTION INITIATION FACTOR TFIIDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005669
all species →
Cellular Componenttranscription factor TFIID complexInterproscan
GO:0006367
all species →
Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0016251
all species →
Molecular FunctionRNA polymerase II general transcription initiation factor activityInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERXEIP00000022257.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP