Detailed information of BRAKERXEIP00000024437.1 in Muricea muricata

Genomic Location: chr11:2647076...2663280
NR annotation: CAB4024832.1, ZGRF1 isoform X2, partial [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q86YA35'-3' DNA helicase ZGRF1 OS=Homo sapiens OX=9606 GN=ZGRF1 PE=1 SV=3
Q0VGT45'-3' DNA helicase ZGRF1 OS=Mus musculus OX=10090 GN=Zgrf1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002716 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06839
all species →
zf-GRFGRF zinc fingerDomainInterproscan
PF10382
all species →
DUF2439Protein of unknown function (DUF2439)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR010666
all species →
DomainZinc finger, GRF-typeInterproscan
IPR052800
all species →
FamilyDNA Repair Helicase ZGRF1Interproscan
IPR018838
all species →
Domain5'-3' DNA helicase ZGRF1-like, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR28535
all species →
ZINC FINGER GRF-TYPE CONTAINING 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006302
all species →
Biological Processdouble-strand break repairInterproscan
GO:0035861
all species →
Cellular Componentsite of double-strand breakInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for BRAKERXEIP00000024437.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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