Gene detail

Detailed information of BRAKERXEIP00000024751.1 in Muricea muricata

Genomic Location: :...
NR annotation: CAB3988810.1, LIM homeobox transcription factor 1-beta-like isoform X4 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8UVR3	LIM homeobox transcription factor 1-beta.1 OS=Xenopus laevis OX=8355 GN=lmx1b.1 PE=2 SV=1
Q9JKU8	LIM homeobox transcription factor 1-alpha OS=Mus musculus OX=10090 GN=Lmx1a PE=2 SV=1
P53413	LIM/homeobox protein LMX-1.2 OS=Gallus gallus OX=9031 GN=LMX1B PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan
PF00412	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR001781	Domain	Zinc finger, LIM-type	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR050453	Family	LIM/homeobox transcription factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24208	LIM/HOMEOBOX PROTEIN LHX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0030182	Biological Process	neuron differentiation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09371	LMX1; LIM homeobox transcription factor 1	-	Transcription factors	ko03000	deepkoala