Gene detail

Detailed information of BRAKERXEIP00000024890.1 in Muricea muricata

Genomic Location: :...
NR annotation: CAB4015921.1, serine threonine- kinase ppk4-like [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERXEIT00000024890

ATGGATGCAATTGGGAAATTATTAAGTGAACAATTGCCGGATGCTGCTGAAGGGAGTGAGCATCAGAAATACTACTACCATTTTAATTTAGGCCTGGAGGCTTACTCGGCTAATCAGCACGAAAatgctttgaaatattttgaacgATGCTTAAAAATAGCTCAGGATTTGGAAGATCGAGATTTACTGGAGTTTTTTGCATATTACGGATTGGGCTACTCTCACGCATTGACTAGTCGCTATGGACAAACCGTCGATTGCTTTAACAAGTGTTTGAACCGCTCTCAACAAATCACAAGCCGCGATAGTAATGGCGTTGGTGGGAAATCTTTTGCTGCTTTTGCCTACATTGCATTGGGCGATAGCGAATTGTTCCTTGGTCATTCCAAAAAGGCATTGACATTTTTTGAGTCCGGACTAAAACTTGCAGCACAAATGCATGATAACGAACGAGAGTTGGTATGTTATTTAAAGTTGGCCGATGTGTACAAGACTATTTCTCAGTTTCCTAAAGCGTTAGAAAATTACAATAAGTGTTTTGAAAAAGCTGAAGGGAAAACAGACAATCCAATTGTTTTGCGAACACGTTTGCGAGCGCAACAGGGATTAGGCGACGTGAACAATCAAACCGGAAAGTTTCATAAAGCGCTGAAACACTATAAGGAGTCTTTGAAGATTTTGTCCACAATAAATGACGATGAAGATAAGTTAATATATGAAAAATCACTCATATTTGCAGCAATGGGGTATCTGTTCGGACATACTGGACAATCGACTGAAGCAGTTAAGTATTATGAGATGTGTAAAGAATTTAGCTACGAACTGGGTAACAAATCCTTAGCTGCCCGTACATACTTAGGTTTGGGGCACGTTTTTGTCATGACaggaaaatgttttaaagccaCTATCAATTTTGAGAAATGTCTGGAAATTGCGTTGGAACTAAACGATAAACATCTTGAGGCAACTGCGAAAGTAGGCCATGGAGATGTGCATCTGTTAACTGGAGATATTTCGACAGCGATAGAGTATTACCAAGAATCGTTAGAGATTGCAGAGGAATCGGAATTGCGCGATGTCAAAAGAACATCCCATTTAGGGCTGGGAAATGCATACGCGACAACCGGTGAATACCCAGAAGCAGTCCAACACTTGGAGGAATGTTTAAAGCTCTCTGTGGAGGTTGGCGATCAATATCACGAATGCCAAGTGTATCTTGGATTGGGAGATGTTAAAATTTTTGATGGAAGGTATGAGGAAGCACTAGAGAACTTTAAGAAAGGATTGAATATTGCTGTTGAAATTGCCGAACGAAATTGTCAGTCCAGAGCAAAGAGAAGTTTAGGTGATGCTCTGACGATTTTTCCCAAAACCAATGACGCTATAGAGCACTACGAAGAAGCTTTGACAATCGCCAAAGATATTGACAGCACACATGAGAAATCGCGAAGTCATCTTGGTTTAGGAAAAGCGTTTAAATCACTTGGTAGATATGAAGAAGCGCTGAAACACTATGAAAAAGGAATTGCTTTGGCTACGGAAATGAGCGAAAGAAACTTGGAAACCAACGACTCCTGTATGCATCCAGATCAAACCAACAAAAAAGCATCAAACGATTACATGAAGGGACTACCGTTTGCCAACTTATTGGGAAATAAATTTGGAGCGTTAACAGCATATTGGGAATTGGGGGATTTATTCAATGAATTGAAAGAGCACCAGAAAGCGTTAAAGGTTTTAGAAATGTACCTTTCAATTGCGGAAGAAACAAATGATTTTGATGCACAAGAAAAAGCATGCAAGCGTATGGTGGAACTATGGACAATAGAAGGTCGAACTTATATGGCAAGGCAGTTTATTCTAAAGCAACAGGCGATTGCAGAAAATCGACAAAAATCTACTTGTGAAACCCCCCAGAAAAGACCTCGTAATGTGTGGAAATGGGAAAAAAGCTCGATAAGTCATCGGGAAACGTTCAAAAAGTTGCTCAAATATGGGCAAGAACATCCGGATGAGGTCAAAGAGATTAACGGAGTACGTGTCTGTTGTTCTGAAGAATTTGATATTGGTAAAGGCAACGATGGTACCCGAGTTTACGTTGGCATAGGAAAAGATGGTTACGAAAAGGCTGTTAAGCGTATGCCCAGAGACACGTGTGAATCCTTTGCTGAACAAGAAAAGAAAGTTTTGAATGAGCCAAGCTTAACACAGTCGAACCATGTGATAAATTACTGGTTTTTAGATGAGAAAAGCGACAAGGACAATGTATATTTGATCTTGGATTTATGCGAGGAAACATTGAAAGAATTTGTTGATCGTAGTGATTTGAACGACTTGACAAGCACGGCAAAAAATATTATTCAGCATTTGTTGAAGGGACTGGCTGCTCTACATAGCAATCCAGTGCCCATTTTGCATCGTGATTTGAAACCATCGAACATCCTGCGCAACGTCCACAACAATTGGTTGCTAGCAGACTTTGGAATTAGTCGAATGCTAAAAAGGGGGTCAAGTACTCACTCAAGCGAGCAAAGGGGAACAAACGATTATAGAGCAGTTGAATCGTATCCTACTGTTGACATGACTGACGAAGAAGAAGTACGTTACAAGAAAGAATCTGACATTCAGGTGGCGGGAATAGTGGCATTTTACATCGTGACAAAAGGTGGACATCCCTTTGGAGAAGAACGATATCGACTGGACAACCTACTTAATGGTAACCCAGTTAGCCTAGATACTTTGAAAGATCCAGCCTTAAAGGATTTGTTGAGCTGGATGTTGAGTTACAATCCTAGCGATAGACCGTCAGCTGAGGAAGCTCTAACCCATCCCTACTTTCAAACTGCAGAACAACAATTCGAAATGTTATGCAAAATTGGAAATCAGCATGAAATTAAGACGGGAAATACTAGTTCAGACGTCGTGCGGAAATTGAATAGTAATACCAAAGACTGGAGGACTTTGATGAGACCCGATATTCTGAGCTATATGTGTACTGATTTTATGCACAGGAGACCATTTAACTATGGCTCAACCTGGACGGAGTCTTTGCGACTTATGCGAAATGTTAAAGAACACTGGTACGACCGACCACGTCCATTACCACAACCCGCGGCGTTTTATTTAATTGGTCATCCCAGAGAGTACTTCCTTAATTTGTTTCCCAAATTTCCAGTTGAAGTACACAAGATCATCAGATCATGTGATTGGAAAGAACGCCCGGAACTTCAAAAGTATTTCATTTGTGGTGCGCGTGATTGA

Transcript

BRAKERXEIT00000024890

Protein

Uniprot

Uniprot term	Description
G0RBE3	Serine/threonine-protein kinase/endoribonuclease IRE1 OS=Hypocrea jecorina (strain QM6a) OX=431241 GN=IRE1 PE=2 SV=1
Q05823	2-5A-dependent ribonuclease OS=Homo sapiens OX=9606 GN=RNASEL PE=1 SV=2
Q5ZCI1	Mitogen-activated protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=MPK10 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF06479	Ribonuc_2-5A	Ribonuclease 2-5A	Family	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR038357	Homologous_superfamily	KEN domain superfamily	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR010513	Domain	KEN domain	Interproscan
IPR052386	Family	G-protein-signaling modulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954	LD33695P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004540	Molecular Function	RNA nuclease activity	Interproscan
GO:0006397	Biological Process	mRNA processing	Interproscan
GO:0000132	Biological Process	establishment of mitotic spindle orientation	Interproscan
GO:0001965	Molecular Function	G-protein alpha-subunit binding	Interproscan
GO:0005092	Molecular Function	GDP-dissociation inhibitor activity	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan