Detailed information of BRAKERXEIP00000025849.1 in Muricea muricata

Genomic Location: chr13:944253...945692
NR annotation: CAB3992399.1, transcription factor IIIB 50 kDa subunit [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009939 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for BRAKERXEIP00000025849.1 in Muricea muricata.
 InterPro
InterPro termTypeDescriptionSource
IPR036915
all species →		Homologous_superfamilyCyclin-like superfamilyInterproscan
IPR000812
all species →		FamilyTranscription factor TFIIBInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11618
all species →		TRANSCRIPTION INITIATION FACTOR IIB-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006352
all species →		Biological ProcessDNA-templated transcription initiationInterproscan
GO:0017025
all species →		Molecular FunctionTBP-class protein bindingInterproscan
GO:0070897
all species →		Biological Processtranscription preinitiation complex assemblyInterproscan
GO:0097550
all species →		Cellular Componenttranscription preinitiation complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15197BRF2; transcription factor IIIB 50 kDa subunit-Transcription machineryko03021deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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