Gene detail

Detailed information of BRAKERXEIP00000025929.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB4003313.1, Centrosomal of 120 kDa, partial [Paramuricea clavata]
Species abbreviation MMURI · all data for this species · gene families

Sequence

CDS

BRAKERXEIT00000025929

ATGGCTGTATCTAATCAAGTATTACTGGTGGCATCCATTCTTGAAGGTCGCAGGTTTCCACGCAGACCAAAACATCAAATTATTGTTGAAGCAAAGTTTGATGGCGAAACATTGTGTACGGATCCAATTGATCATAAAGAGAGTCCAAACTTTACAACAGAGCTGGCATGGGAGTTGGATAAGAAAGCTTTACATCAACACAAGTTGCAAAGAACACCTATTAAATTACAGTGTTTTGCAATTGACACAATTCTCTCCCAAAAAGAAATGGTTGGTTACATCATTCTGGATTTAAGGTCTGCACAAGCAAAACTACAGCGTCCACAATGGTTTCCACTACTGAACAGCAAATATCAACGTCTCAAACCAGAAATACAAGTAATGCTAAATTTAGAAGATGATTCAGTGAAAAAACCCGAACAAGGACCATCACCACAACATTCCACTCCCAGCAGGAAAGTGGATGAAATTCATCCAGGTAGTCTCCAACCAGTTTTGAATGAAGAAAAAGGTTTCTACCAACTTGGAGCAAACATTGAGTCATCACAGATCTTTGTCCTCTCTGTAACCATTAGTTATGCTGTGAACTTAGCAAAGTTAATTCCGTCATCATTTGTCGTACCAGATGGTCAAGGATTCTACTTTCAATACAATTTATTTGGTAACAACGTCTCCAGTGATATCTTCTCGGATTTACTCCAACCCAATTTCTCTCCAGAGCGAGCTTCTGTGAGGATCAGTTCTCAACCCAACCTGCTTCGAGTTTTCCTGCAACATTTTCCTGGCATTAAGATTACACTGTATTGCGGTGGTTATAACTTGGGAACAACAGACATCTCTCTGCGTTCCTTACTGACCACTGATAACCCTCTAACATCCCCTGCTGTACATGAAGCGCTGTTTCCACTCGTGTCTTCGAGTGGAGAATCTCATTCTGGGTCAGATCATGACGTACCAGCTATAGGAGTTTCTGTGGTGTTAAAAAATGATGCAATGATTCTACACCCTCCTCCTCAAGACGCGAGACCTACGGATGAGAGTATACACCCAAGCGACCATCTGAAACCTCGCGATGAGAATAAAGACCAAAGATCAGACGCCATTCCTCGGAACAATGGGCTACTTGAGACAAATGAAGAACATGCAGGAAGCAAGACTGAAAAGACGAAGAAGTTTCCAGATGCCGACACATCAGAAGGTCAACCACAAGACAAAAGATTATCATTCCATCATTTCTGCTACTCTGTTGATCTGCACAGTATTTGTGATCTACAAGTCACAACTTCTGTTAATTGTTACTTGAAATATTCCTACCCATTTTTCGGCAGCTCTGCACCAGTCATCACCAGTCCACCAGTAGAAGTACGCAGACATATGAAGGTTTTATTACCGAAATCATTTTGTGCATTTGATTTTGCGACCAATCCTGAAGTGCTAAGAGAAACGCTATCAAGCGTCCCTCTGGTCATTGAAGTCTGGCATAGTGATCCAGTCACTAAAGACGTCTTACTTGGCGTTGCCAGGGTAACACTTGGTCACGTCTTTGCTGCTAAGAAACTGAAAGCTGCGAGAGGAAAACCGAGTACTTACGGACAAATTTTGAGTGAGCGAGTTCATATTATTGCTGATGATAGAAAACCAATTGGAGAGCTGAATGTTGTGTTAGGACTGGAAGATCTTGGACCGGTTTCCCGTGAACACTTGCAAGCTCGTATGAATGGGTCAGAGTCGTTCTCCTCCAGTGTAGAAAGTCCAAAGCGAAAATCACCTACGAAATCTCGGAAAGAAAGCTCTGGAAATAAGGAACCAACGAACAATGATCACGGGATTAATGACCCCAGGACGATGGCAGAATATCAAACTGCTTTGGAGCTTGAGATGTGGAAACAACAGCAAGAGGAAATGTTCACAGCTCAGCtcaaagcaaaagaaaatgaaaaaattaaaacgttAACAGAGGAGTGGAGAAAGAGAGACAAAGAAAGAGAGATTTTAACGAAGAAAAAACTTGAAGAATATTCCCAACTGGAGGAAAAACTAAAGAAAGCAATTGCTGATATAGATAAGAGGGAAAGACACCTGTCAGCGAGTGAAATTGAAGTTATGATGAATATCAGCAATGGTTTTAATAACTTCTTTGGCACGTGCACATTTGTGCATATTTCTGTCACAAGAATAAGAGAGTTTCCTAGCAAGAATTACAAGTTTGCCCAAATTACACTCCTCGTTATCAACATAATTGTACTGCTCTCGACGATATCATTAAATGGGTTCTCTATAATAACGATCAGAAAATCATCTCAGCTTCGAAATAAAGTGTGTTACTTTGTGATCCTACTCCAGTCCGTCGTCGATCTATTCGTTGGTCTTCTCACCATCCCCCTAACCTTCTACTATTCACTGTCCCCGTTCCTGAAGGATCCAAACTGCGCTCTAATCGTACTAGCTTTCCGGACCCCTCCCCTACCTTGTGGATTGTCCATAGTCACGTTATCTGCGATGACAACGGAGAGATATATGGGCGTGTTGTATCCGTACCGATACCAAACCACGGTAACAAAGAAAAGAATTTTCGTCTTCGTGGCTGGAAGTGGTTTCGTTGTCTTCTCGGTTGTCGTTTCTTCATTCTATGATCAGCAAGtcatgttgtattttattagAGTGTTTATTTCAGTATTCCTGCTTTTTACGTCCTTCGCTTACACTAGAATATATCTTGAAATATGGAAGTTGATTCGCTCGGAGGCGTACCCAGCTGGAGCAAGTGAAGAAAggcaaagaaaaaagaaagtcCTCCGTGCAAGGCGACATGCCACCTCCTGTTTTCTCATCCTAGTCTCCTTTTTTCTTCTGTTATTTCCTGTGATACTCGTGCCAGTCTTCCTGACGATCGACAGTTTTCATCATGCAGTGTATTTTAACTGGTCAGTTACGTTAGTGATCCTTAACTCAACCGTCAATTCTGTGATATTCTTTTGGACGAAAACATTGCTGAGAAAAGAAGCTTTGAAAACACTCAAATCTCTTTGCTCCTGA

Transcript

BRAKERXEIT00000025929

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B1H2P5	Centrosomal protein of 120 kDa OS=Xenopus tropicalis OX=8364 GN=cep120 PE=2 SV=1
A0JN62	Centrosomal protein of 120 kDa OS=Bos taurus OX=9913 GN=CEP120 PE=2 SV=2
Q8N960	Centrosomal protein of 120 kDa OS=Homo sapiens OX=9606 GN=CEP120 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005633 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF00001 all species →	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF12416 all species →	DUF3668	Cep120 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039893 all species →	Family	Centrosomal protein of 120kDa-like	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR017452 all species →	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR000276 all species →	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR022136 all species →	Domain	Domain of unknown function DUF3668	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21574 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005814 all species →	Cellular Component	centriole	Interproscan
GO:0007098 all species →	Biological Process	centrosome cycle	Interproscan
GO:0022027 all species →	Biological Process	interkinetic nuclear migration	Interproscan
GO:1903724 all species →	Biological Process	positive regulation of centriole elongation	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERXEIP00000025929.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.