Gene detail

Detailed information of BRAKERXEIP00000026475.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: XP_028411308.1, ras GTPase-activating-like protein IQGAP1 [Dendronephthya gigantea]
Species Muricea muricata · all data for this species · gene families

Sequence

CDS

BRAKERXEIT00000026475

ATGGACGGCTTGGTAGGCGGCGAGGAAGAAAAAGCTATTGTTGGCTCCATAAGGCACGTTCATAGCCCTGTACCGGAAGAGGACTCAGTCTTTTCCGACGAAGAACAATTGAATCCACTTGTTGAAGTGGACAGCGACTGCGATTATGACACGGATATCGAAGAAGAATCGAAAGGTGCAGAAAAATACGACATTGAAGGAAAGAAAATGTACCTTAAAGTGTGCGAAGACATGAACATTGTGCCTTGCACGCCATTTTTACGCCAGTTGCCCCAAGAAGACGTGAACATAAGCCATTACAACGTCGGACCCGTCGGCTGCGAGGCAATAGCCATCGCGTTGATGAAGAATACCAACGTTCTAACGTTGAATGTTTCCGACAATGCTGTCGGCGGCGAAGGAGCCGTGTATATTTCGAAGCTATTGACCGAGAACTGTTTTATATCCGGGCTTGATATTTCACAGAACGCGCTCGGCACGCAAGGGGCTTATGCGCTGTCGGAGATGCTACGAGACAACACCGATTTGGTCGAGCTGAATGCGGCTTTAAACAACTTCAAGGAAAAAGATTTCGAGCCGTTCGTTGACGCACTGAGGGAGAATTACacattgaaaattttaaatctCAGTGGAAACAGTTTCGACTCGTTAGCAGGTCTGTTGATGGGGCCTGCAATCAAGGACAATGTCGGTCTGGAAATACTCGATTTGAGTTGGAACAACATTCGCGGACGTGGAGCAGAGGTAATCGGCGAGTCCTTGCGGGAAAATTGCTCGTTAAAGGTGCTCGACTTGTCCTGGAACGGTTTCGGAGACGAAGGCACGAAGGCGATATGTGAGGCGTTGATGGTGAACGACACCTTAGAAGAGCTAGATTTGACTAGTAACCGGGTAACGGTTCGCGGGGCCCGAGAGCTGACGAAAATGCTTGCCGTGAATACGAGCTTGCAAGTATTGAGGCTTGGAAAGAATCCGTTCCGATGGAACGCAGCCCTGGAGATTGTGAAAGCAGCCGTGGAGAACGAAGAAGGACAGGCCCGCGATTTTTTCTTCGATGATATGCCGGTGATCAAAGCATTTGAAGACGGCCTGGACGAGATTATGACGTCGTGTCCTGACTTAATGGTTCAATGTGGAACGAAGTTGAAAGGCAAGGAGCGCACGAAGAAAGAGAAGAAGAAAAGGGACCTGCTCAACCTGCTTCTCGAGTACATCGAGATGCGGGGACTGCGCATGTACGATATGTTCAAAATGCTGGACCGAGACAACAACAATTACGTCACCCACGACGAGATCATGGCCGGACTCAAGCGGACGGGCCTTCCGATGACGAACGACGAGATCCGTCGGCTCATTACGTTGCTTGATCGGAATAACGATGGCGCGATAAGCTACAAGGAATTCTTGCAGATACGAAGAACGAAGGCGATCAACAGGACCATCGAGGATGAAAACCCAGCCGCTACCCTGACGTCATTGCAGCAAGAGCCCGCGAAGCTGAGTAATGTACTTCCGGAAAATGCTCTCCTGTATCAAGCTTTACTGTATGCCGATAAACAAGAGAAAAAGAGGAAAACGAACGACCCGTCAGCGGAATTGTGGCATGATGAAATTCAGAGAATCATTGATAAATCCAATCTTTATGCAATTGATGCTTGCAAACTGGCGGCTGGCGTGACGAAAATCAACGAATCACTGGGGACTGGTAATGAGCAAAGTACAGTCGAGGCTCTTGAGAATGCTGACGTCGGTCTGCGGGGGGTAACACGAGAATGTCAGGCTACGTATCACACATCTCTGAAGGAAACCAAGGGAAAGAAAGGACAACAAGCTGGGCCTTGGTTGGAACAGAAGATTCCACAGGGCTTCCTGTTTTATTACAACACAGCAACACAACAAACAAGTTGGTCGAAACCTGCCGATTTCACGAACAACGCCGGATTTCTTACTAAAGAGGAAATACAAACAGTCGTTTCAAACGAGACTGCCAAACATGGCCGTCAAGTGTACCTTCAAGCAAACGAACCGTCTTTCGTGAAACTGCAGTCTCACTGGAGAGGGTATTTAGCGAGGAAAACATTCAACGAGAGAAAGGAATTCATGACAAGACAACTGCCGGCCATAATCAAGATTCAGGCAAATTTAAAGCGATGGATGCAACACAAGAAGTACAAAGAAAGACTGGAGGTTCTTCACAATAATGACGACGCCATTGTTAAGATTCAAGCATGGACCAGAATGCATTTGGCGAGGAGTAAATATCAACAGCGAAAACAGCTTTATGAAGACAATTTGCCATCGATTATCAAGATTCAGGCGTTTATGCGAGCAAATCTTGCCCAACATGATTATCGAGCTTTGTTAAATTCCCAAAATCCACCAATTAAGATTGTCCGCAAGTTTCTGCATCTTCTGGATCAAAGTAGTGTTGATTTTGAAGAAGAATTAGAACTTCAGAAGCTTAAGGCCCAGGTGGTGACTGAAATTCGTTCCAACCAACAGCTAGAGCATGACCTGCAAGGCATGGACATCAAAATTGGTTTGTTAGTAAGAAACAAGATTACGTTACAGGATGTTATAATCCACAACAAAAAACTGACCCGAAACGAACAGGATCTTCAAACTCTCGCCTCGTCGAACACGAAGGGAATACGGTCGCTGAGCAAAGACAGTCAGGAAAAACTCGAAGCTTATCAAAACCTATTCTATCTTCTTCAAACTAACCCTGTGTACCTAGCGAAACTTATCTTCGAAATGCCCCAAAGTAGATCTACGAACTTTATGGAATCTGTGATTCTCACGTTGTACAATTACGCCTCGAATACTCGGGAAGAATATCTGCTGCTAAAGCTGTTTGAGACTGCATTACGGGAAGAGATCTTTTCGAAAATCGACAGCATTCAGGAGATAGTGACGGGTAATCCAACAGTCATCAAAATGGTAGTCGGATTTAACAGGGGCACTCGTAATCAAGGGTCCTTGAGGGAACTACTGCAGCCTCTAGTCCAGACAGTCTTGGGTGACTCGACACTTAACACCTCGACGAATCCGGTGGAAATTTATAAAAGCTGGATCAACCAACAGGAGTCTGAAACTGGACAGGCGACGAAACTTCCTTATGATGTTGATCCCGAGCAAGCGATGGACCACCCAGAGGTTCGAAGTAAAGTTGAAGCAGCCATAAGTAGACTGACTGCTGCTACGGACAGATTTTTGCAAAGTATCACCGCGAGTGTTGATAAAATACCCTACGGTATTCGATATTTGGCAATGACTCTTCGAACGTGTTTGGCCGAGAAATTCCCCGATGCCGGCAAAGAAGAAATACTTCGAGTTGTCGGCAATCTCATATATTATCGTTATATGAATCCGGCAATTGTTGCACCAGATGCTTTTGACATCGTCGACGTCAGTGTGGACAAAAGTTTGACAGTTGAACAGAGAAGGAATCTCGGTTCCATATCAAAATTACTTCAAGACGCAGCTTCCAACAAGAAGTTTGGTGGTGAAAGCGCGCACTTAAACGCGCTGAACCCGTATCTGGATAAAGCACATCAAAAATTCTTACAATTTTTCATGGCTGCATCAAACGTTGAGCAACCCGAAAGCAAGTTCAATATCGATGAATACAGTGACGTGGTGATGCTGACGAAACCGGTCATCTATATCTCGATCAAGGAGATATGTGATACTCATAAACTCTTGCTTGACCATCGCAATACTATAGCACCAGATAATAATGATCCTCTccaagaattattggatgatgTTGGTGATCATGCTGATGTCAAAGAGTTGTTAGGAAATGTTGAAGTGGCTGAAGGTCAAACGGAAGAAGACGCTCTGCGCGATCaagaaaaaactgaaatatcccTAACGTTATCAAATAAATTTGAAGTTCCAGATGACGATGACTCAGATCTCCGCGCTCTCTTCGTCAGAACTAAGCATCTTATCGTGGACGTAATTCGAGTTCAGGCTGGAGACACGCTAACGGAAATTTTGGAGACGCCAGCCACGGATGAACAGGAAAAGGAGCACATGGTTTGGGTGAAGCAAAGagaaaaacaagattcgaaaaagGAGGACAAGATCAGAAAATCCGCCTCCGTACATGGCGATTCTAATTTACCGGTTGAAGGCATTAAAAGAAAGATCATACGAAATCTGCGAGTGCTAGAGAATCAGGGTCTCGTTACAacgaaaaataattatcaagATATCGTCAACGCTATAGCCAAGGATATAAGAAACCAAAGAAGATACAGAATGCGTCGTAAACAAGAACTAAGGAAATTGGAGACAACTTTAGAACGACTGAAAACAAAAGCGACATTCTATGAAGAACAAATGGACTATTATAACAGATATATTGAAACTTGCTTGGATAATCTCGCTGGCAAGGAAGCCATATCCCAACGTAAAGAAAAGAAGAAGCAAGAAGCATTTAAAACAGCTGTCAAGTATAGCGCACAAAAGTTGGCAGAGAAAGGAGTTGTTCTAGAAATTGAAGGCCTACCAAAGAACCAGTTAAAGAACGCCTCGTTCGAAATCGTTCCCGCCGACTCGGGAGTGTTTGAAGTCTCCGCTAAATTTATGGGAATTCCTATGGAAAAAGTCGAAATTGTTTTTCAGGATTTGCTTCAGCTTCAGTTCGAAGGTGTCGCCGTGATGAAAATGTTTGGGAAAGCCAAAGTCAATGTTAATTTACTCATTCAtttattgaataaaaaattctaTGGTAAAACATAA

Transcript

BRAKERXEIT00000026475

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P46940	Ras GTPase-activating-like protein IQGAP1 OS=Homo sapiens OX=9606 GN=IQGAP1 PE=1 SV=1
Q9JKF1	Ras GTPase-activating-like protein IQGAP1 OS=Mus musculus OX=10090 GN=Iqgap1 PE=1 SV=2
Q13576	Ras GTPase-activating-like protein IQGAP2 OS=Homo sapiens OX=9606 GN=IQGAP2 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002348 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00612 all species →	IQ	IQ calmodulin-binding motif	Motif	Interproscan
PF00616 all species →	RasGAP	GTPase-activator protein for Ras-like GTPase	Family	Interproscan
PF13516 all species →	LRR_6	Leucine Rich repeat	Repeat	Interproscan
PF03836 all species →	RasGAP_C	RasGAP C-terminus	Family	Interproscan
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001202 all species →	Domain	WW domain	Interproscan
IPR023152 all species →	Conserved_site	Ras GTPase-activating protein, conserved site	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR001936 all species →	Domain	Ras GTPase-activating domain	Interproscan
IPR000048 all species →	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR000593 all species →	Domain	RasGAP protein, C-terminal	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14149 all species →	RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0043087 all species →	Biological Process	regulation of GTPase activity	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0005938 all species →	Cellular Component	cell cortex	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan
GO:1903479 all species →	Biological Process	mitotic actomyosin contractile ring assembly actin filament organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16848	IQGAP1; Ras GTPase-activating-like protein IQGAP1	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.