Gene detail

Detailed information of BRAKERXEIP00000026545.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB3991663.1, chloride channel C-like isoform X1 [Paramuricea clavata]
Species abbreviation MMURI · all data for this species · gene families

Sequence

CDS

BRAKERXEIT00000026545

atggaGAGCGTTCTCGGTACTCGTCAACGTAGGCAACCGAAACGAAGGACGATAGTTCCGAGAAGCAGCGATTTCGAAAGTGAGGAGGACAAACATGAATCGGCAACCAACGATAATTCAGATCATTGCCTGACACGCGGCGTAATGTTTAAGAACTGGATAAAACGTCAGCTGGCTCTTGTTGACTGGGAAAGATGGGCATTGATGGGTCTAATTGGTTTCACGATTGGATTTGCTGGTTTTCTACTACATCGAGTAATTGACATGATTATGTGTTATAAATGGCAAATggcaaataaattaattaagGAGAAAGGTTATGGTCGAGCTTGGCTATGGGTCGTAAACTTCAGTATTATCTTCGGCTTACTTAGTTCGTCGATACTTGTGTTTCTTCGGCCATCAACTGCTGGTTCATGTATCCCGGAATTGAATGGAACGATTGTCCGTCATATTTTTAATGCGAAAACGAAGGCAATGCAATTCTTCTCATGCGTCTGCGCCCTGGTGTCCGGGTTGCCGATTGGTCCAGAAGGACCCGTGATTTATTTGGGtGGCTTGATTGGTCTTAGTCATCTAGAACGAAATCCTCCTTATTTTCGCAGATTCAGAAATCCGGAAGACAGACGTAATTTTATTTCTGCCGGGGTCGGCGCTGGCGTTGCTTCTGCCTTTGGCGCTCCTGTTGGCGGCCTTTTGTTTGCAATGGAAAAAATATCATCATCGTGGGATATAAAACTATCTGGTCAAATTTTCTTTTGCACCATGGTCACTACACTCACGACGGGTCTCTTCAGTTTGGCTTTTAGAGGTTACAATGACGCTGAAGACTTTGGATTGTTCAAACCAAGACGGTACATCCTTTTTCAGATTGGTCACGAAGTGTCTTTACATTTTTACGTCTTTGTACCTGTCGTAATTCTTGGAGTACTGGGCGCATTTCTGGGGAGGATTTTTACCTTCATCAATTTAAAGATCAACACGTTTCGAAGTTTATGCTTGGCAAAGATACAGACTGAAATGATCAAGAATATTGTCCGTATCTGTGAAATTTGTGTGCTTGTGATAATTGTTAATGCTGTTTCCGTGTTCTTGCCGTCTGCGTTTTCATGTCCAGAATACAATTGCTTCTTCGAGGAATTTCATCCTTTGTTAACCACGCTTGTGGTGTATTTTATCTTGACATGCTGGACTGCAGGAACGGCAACATCAAGTAGTCTGGTCATGCCTATGCTTTTTATAGGTGGTGCATATGGTAGAATTATTGGTAAAACGATGGTAGATATATTTGGTGTTCACACCGAAGGCGAATGGGCGTGGATGAATCCGGGAGCTTTTGCTTTAATTGGTGCGGCGTCGTTTTTTGGTGGGATGCCTGGAATAACTATGTCCTTGGCTGCGATTATGATTGAAATCACGAACGATACCGGGTGTCTGCTTCCCATCTTAGTTGCAATGATGGTTGCTAAGTATGTAGGAGATTTCTTTGTGCACCCGATGCTTGAAGCCATGGATCTCGTGTCTTCACCCGCTGAGAAAAAAGACGACGATATAAAAGATTCAACAAACACAGACGAATGTGAAGGCAAAGATATTTCGAAGAGAATTTCAAGCGACTCTAGCGGTTGTTCGGAAACGATGGGATCCAGTTCATTTAGGTCCATAGGTCCGATGAAACTTCGCTTCCTAAGGGAACATTGTTGGACTGAAATTAAgaagaaagaaaatatttgcaaagaaGAATGCGTCACTGTTTCGAATGTTGATAAAAACTCATTCGAGATCAAGGGAACAAACGCAGGCAGAGACGAAATGATTATGTTCCTGACAGGACTGGCTGCAAATGTTGATTGTGAGGCGTTTCCTCTCAACGGACGTGGTATGAAAAAACAGATGAGTATGGATGAAACAGATTCCATTATTTCTGACGTTGAGAAGAACCATAAATGTGTCGTTGAGAAAGTTATTCCTACCGAAGAAAGAGGGAAAATGATTGTAGCAGATGGAGGGAATGCCGCTGGGACTGGTGGAGCTTCCGCCATGAAATTGCCGTACCATTGCATGACCTTTGTCAACGACAAGGAAGTTGAATTGGACTCAGGACAAAGAATAAGGATTGTTGTCGGAGATTTGACACAGGAAACGGTTGACGTCATTGTAAATACAACAAATGATAATGTGGATTTGAacgccagcgcgtgtggaagaGCTTTACATAAAATTGCTGGTCCGGAATTGGCgaatgaatgtaataaaattGGCAATCTTCAGGCTGGAAACATCGCTTCAACTGGACCGGCAAAACTGAACTGTAAACGCGTGTATCATGTCCGTTCATCTCCGTGGAACAACGGGAAAGGAGAATTGATTCTTCGTTTGTTGATTCGAAAATGTCTCGACCAGATGGAAAACGACAAACTAAGATCTATTGCCATTCCTGCCATCGGGACAGGAAATTTGTGTTTTCCATGTGGAGAAGTTTCGAAAATCTTCTTCGAAGAGGTGACACGCTACCTCATTGGCCACCCCCTTTCGCTCATCGATGATATTCGCTTTGTAATGTTTTTTGGCGATCTGGTAGCCGTGAAAGCATTTCTAGATGCAGTGCAAGAAATCAAATCGAAAAGTAAATATTCGCGTCAAAATCCTGctagtgatttttcaaattttgcaaaacCACTAGCAGGAGATGCAGGTAATATGTCTATCAAGATTTATTGTAATGATCGGGTGAGGATAGAGACGGCGTGGAAAGAGTTTAAGAGAATGATCAATGCTAATATTCAAGACATGACAATAAGGGATGAtgtcattaaaaaaattactggCCGCGATCGTGAAAAAATACGTAAACtggaacgcgattttgatgttaAAATCCAAGTAAACCAGAGAAAAGATAATCTTAGAATCAAGGGACACATTGCTGACATTTTAAATACCCATGACCAAATATGGAAACTTCTGAAAGATATCAAGGATAGAGAAAACAAAGTTCCGGCGTACTGGGATACAACATCTGATGAGAGTCCATTTTACAAATTCAAACTGAACGTTGACAGTGAAGAATACAAGAAAGTTGAAACAGCATTCCATACAACCGCCCGAAATGAAATTGTCTCAATCGAAAGAATACAAAATAAGGAAATTTATAAGCTTTACAACGTGAAACGCGAAGGAATGATGAAAAAACATGGAAGTAATTTTACCAGTAAAGAAAAGATGTTGTTTCATGGCAcatcttttcaaaatcttgaGAAAATCAATGCTGGTGGATTGAACAGAAGTTACGCAGGAACGCATGCCAAGAGATTCGGCAGTGGTGTCTACTTTGCTCGAGATGCTGTCTATTCCTGTAATCAAACCTATTCACCACCGGATATTTCTGGATTTCGCTACATGTATTATGCAAGAGTTTTAGTCGGAGATTACACAACCGGGGACAAAGACATGCTCGCACGACCGTCCAAGAAGTCAGCGGACCCGAATGAAACGTATGACTCGGTGGTGAACAATATGAATAACCCAAGTATATATGTTCTGTTCAAAGACTACGAGTTTTACACTGAATACCTTATTACTTTTACTTAA

Transcript

BRAKERXEIT00000026545

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q86AZ6	Chloride channel protein B OS=Dictyostelium discoideum OX=44689 GN=clcB PE=3 SV=1
Q54AX6	Chloride channel protein A OS=Dictyostelium discoideum OX=44689 GN=clcA PE=2 SV=1
O35454	H(+)/Cl(-) exchange transporter 6 OS=Mus musculus OX=10090 GN=Clcn6 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005796 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00654 all species →	Voltage_CLC	Voltage gated chloride channel	Family	Interproscan
PF00644 all species →	PARP	Poly(ADP-ribose) polymerase catalytic domain	Family	Interproscan
PF01661 all species →	Macro	Macro domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002589 all species →	Domain	Macro domain	Interproscan
IPR043472 all species →	Homologous_superfamily	Macro domain-like	Interproscan
IPR052056 all species →	Family	Mono-ADP-ribosyltransferase ARTD/PARP	Interproscan
IPR001807 all species →	Family	Chloride channel, voltage gated	Interproscan
IPR036612 all species →	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR012317 all species →	Domain	Poly(ADP-ribose) polymerase, catalytic domain	Interproscan
IPR014743 all species →	Homologous_superfamily	Chloride channel, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14453 all species →	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0003950 all species →	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0010629 all species →	Biological Process	negative regulation of gene expression	Interproscan
GO:0070212 all species →	Biological Process	protein poly-ADP-ribosylation	Interproscan
GO:0140289 all species →	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404 all species →	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan
GO:0005247 all species →	Molecular Function	voltage-gated chloride channel activity	Interproscan
GO:0006821 all species →	Biological Process	chloride transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERXEIP00000026545.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.