Genomic Location: :...
NR annotation: CAB3978428.1, mediator of RNA polymerase II transcription subunit 16 isoform X1 [Paramuricea clavata]
| CDS |
| BRAKERXEIT00000027280 |
| Transcript |
| BRAKERXEIT00000027280 |
| Protein |
| BRAKERXEIP00000027280.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF20718 | Med16_bridge | Mediator complex subunit 16, central helical bridge | Domain | Interproscan |
| PF20719 | Med16_C | Mediator complex subunit 16, C-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR048616 | Domain | Mediator of RNA polymerase II transcription subunit 16 , central helical bridge | Interproscan |
| IPR048339 | Domain | Mediator complex subunit 16, C-terminal | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR048338 | Family | Mediator complex, subunit Med16 | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13224 | THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0016592 | Cellular Component | mediator complex | Interproscan |
| GO:0045893 | Biological Process | positive regulation of DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K15159 | MED16; mediator of RNA polymerase II transcription subunit 16 | - | Transcription machinery | ko03021 | deepkoala |
