Gene detail

Detailed information of BRAKERXEIP00000027331.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: XP_028400458.1, malate dehydrogenase, mitochondrial-like [Dendronephthya gigantea]
Species abbreviation MMURI · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q32LG3	Malate dehydrogenase, mitochondrial OS=Bos taurus OX=9913 GN=MDH2 PE=1 SV=1
P04636	Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2
P00346	Malate dehydrogenase, mitochondrial OS=Sus scrofa OX=9823 GN=MDH2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005732 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00056 all species →	Ldh_1_N	lactate/malate dehydrogenase, NAD binding domain	Domain	Interproscan
PF02866 all species →	Ldh_1_C	lactate/malate dehydrogenase, alpha/beta C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001236 all species →	Domain	Lactate/malate dehydrogenase, N-terminal	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR010097 all species →	Family	Malate dehydrogenase, type 1	Interproscan
IPR015955 all species →	Homologous_superfamily	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	Interproscan
IPR001557 all species →	Family	L-lactate/malate dehydrogenase	Interproscan
IPR022383 all species →	Domain	Lactate/malate dehydrogenase, C-terminal	Interproscan
IPR001252 all species →	Active_site	Malate dehydrogenase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11540 all species →	MALATE AND LACTATE DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0006099 all species →	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0030060 all species →	Molecular Function	L-malate dehydrogenase (NAD+) activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0019752 all species →	Biological Process	carboxylic acid metabolic process	Interproscan
GO:0006108 all species →	Biological Process	malate metabolic process	Interproscan
GO:0016615 all species →	Molecular Function	malate dehydrogenase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERXEIP00000027331.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.