Gene detail

Detailed information of BRAKERXEIP00000028640.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB4033685.1, caspase-3-like [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P55210	Caspase-7 OS=Homo sapiens OX=9606 GN=CASP7 PE=1 SV=1
P97864	Caspase-7 OS=Mus musculus OX=10090 GN=Casp7 PE=1 SV=2
P55214	Caspase-7 OS=Mesocricetus auratus OX=10036 GN=CASP7 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000405 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08450 all species →	SGL	SMP-30/Gluconolactonase/LRE-like region	Repeat	Interproscan
PF00656 all species →	Peptidase_C14	Caspase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015917 all species →	Domain	Peptidase C14A, caspase catalytic domain	Interproscan
IPR001309 all species →	Domain	Peptidase C14, p20 domain	Interproscan
IPR013658 all species →	Domain	SMP-30/Gluconolactonase/LRE-like region	Interproscan
IPR011600 all species →	Domain	Peptidase C14, caspase domain	Interproscan
IPR029030 all species →	Homologous_superfamily	Caspase-like domain superfamily	Interproscan
IPR002138 all species →	Domain	Peptidase C14, caspase non-catalytic subunit p10	Interproscan
IPR001258 all species →	Repeat	NHL repeat	Interproscan
IPR011042 all species →	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR050952 all species →	Family	Tripartite Motif and NHL Repeat Containing E3 Ligases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24104 all species →	E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008234 all species →	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0004197 all species →	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERXEIP00000028640.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.