Gene detail

Detailed information of BRAKERXEIP00000028983.1 in Muricea muricata

Genomic Location: not available for this species
NR annotation: CAB3982628.1, Phosphoenolpyruvate phosphate translocator 1, chloroplastic [Paramuricea clavata]
Species Muricea muricata · all data for this species · gene families

Sequence

CDS

BRAKERXEIT00000028983

ATGACCATGTTACAGAGCTTAGCGGCTGCCGTAGCATCAGCTGCCGTGCTAAAACTCGCCAAAAGAAAACGTTTACTGCCGTTTCCTAAATTCAACAAGATAACTATGGCCGTCGTAGTTTTGGGCCATCTATTCGGAACTCTCGCGGTAAACTTTGCCCTTTCGATACACAGTCTACACAGTGAAGATCTTTTGAGAAGCTTTGCACCAATTATTGTATGCTTTTTCTGGTGGCTATTCCGTGATTTCAAGATCAGGAACAGTGTCTACAGTATTCCCAGCTTAGTGCTTATAAGCACCGGATTGCATTTGTTTATCAGAGATGAAAATTTTTCAACTTCTCCGTGGGGAGACATAGCAGCCGTGGTGGCACTTATTATGTTTCCTTTGAGAAACGTATGCTTGAATGCGCTCGGTGAAAGTTGGAAAGATCCTGTCGAGAAGTATTTGATGTTATCGACTTATAGCTTTCTGTTTCTTTTGCCGACTGTGTTAGTTAAACTGGCATATACGAAAATAATGCCTTTAGTAAACCCAACTGTAGCTTTGGAGTCGATTTTATTTCACGTTGCAGACAACTTTATCTCCCTTTTAGTTCTTGAGCTATTTTGTCCCGTTTTTCACTCGGTTATTCGAGCTTTGATACGGTATTCGATAGCTATCCTCTCAGTTGCCTATCTCCCTCGCTCTGTTCATTGGCTTACCGCTGCAGGATTTACCCTTTTCCTTGTCGGGCAGATGGTTTTCCATAAAAAATATAGCTCTGGATACTCAAACGAGCTAAGACGATTCGTGATAACAAGTGTTTTTATTCTAAGCCTTGTACTCGGAGCAAATCTGCTGTGGAATGGTAAATTTAATACAAGTATCGATATAAAACAACCATCGTCCACGGTCGTGTCTTCATTTTGGGTCTATGATAAACCTCCGAGCCGGAACATTCTACTTGGCATGGAAAAAATCCGTGAAAGGACACCGGAGGCGAAATTCCACGTCTTTTGCGGAACGTTTTCTTGCGTGAGAAAAGTGCGAGCTTGGGACAGTCGATTTTCGGTTATGTTTTTAACATTCGACGATTTCGTACGAAATTCGCCCTTAGAGAAATGGTTTAAAGCCCATTCTCTTCACAAAATTCTTTGCAGAGAAGATTTTGAGAATCACCTACATGAAGCAACGAGATTGGCGCTGCTGTGGCGGTACGGCGGAACGATAATCGATCCGTTTCTACGAATGCGCGAAACGCATTTCCCAGAATTTCCATATCGTAATTCGTGGATTACAAGAATATCCAGAGACAATACCTCGGCAATGCTATACGCGTGTCGATTTAGAAAGCGTCATCCTTTCGTGAATAcacttgcaaaaatatttaccaAATTGTATCACAGTTTATGCTATTTGCAGGCAAGATGTAAGGAGCTTGTATCGGCTTTCAACTCTGAATCGTGGAATGCTTTGGCGAATTTTTGTCGTAAGAGCCATCGAACGTGTCCCGACACCATTGAAATAGCCGCGGAAAGAATTATAAATTCTTACCCTAAGCATTATGatataaaatttgaaatgttCAACGCTAATTTTTTTACTGTGGGCATACAAAACATGGCCGTTAGTCAATTTGTCGCTTACCATTTTATGACCATTGATGGTGCTGAGAGTGTGAGGAATGCACGCCCATCGCGAAATGCGACAAAACCATTTGATTTAAAGAATTTTGCAAAAAGTCTGGGCCAACCGCGACATTACTCGTTAGAATATATTGCGTCTTTGCGTAACGATGCCTCACTTGGCCGCCTTGGTACAACAACAACGAAGAATTATCTAAAAGCTTATGAAATCGAAGCTGATCTGTGTGACGGATTAATTCTCCTGATGAAAACCCCGTTAGCTTCTGGTAGTGCAAGAAAAGCCGTCTACATCGTGAATTTAAACGATAACATGATCAAACAACTTCCAGCGATGATTAAACACCGTGGATTGCGCTTAAGTCTAGGCAAAAGAAGTGAATTAAATCTACGCAActggttcaaatcaatttaCGCTCTTCTTAAGAAAATTGCTGCCGCAAAACTGGTTATAACTTCGGATATTTTTTGTGCTAGTGTTTCGGTTGCTTTCGATACGCCGGTACTTCTTGTCACGGCGCGAAACTCCTCGAATGCAACGAGCCATTTATTGCAAATGTTTCATACATGGAGCCCGGGGAATCGAACTTTGGGTCGAATCTTAATCACGAAATTGCTATCTAGTCAAATCCCGGCAATCTCCGATGTTGGTCTGTTCATGCGACTTCGCGCGAAGACGTGGAATGCCGCTCGAAAACATGAGAGCGTGCTGGAGTCAGCTTTGAAATTTGGCGTAGTTCCGTTGAACCGGCCTTTTTCTAATGTCACTCGAGAGAATGTGTTTCATTTGATTTTCACGACTTCTGAAAAGAGTTTGATTTCTGTGGAAGACACGAATGTGAAGGGCAACTTCGTTTGGCGTCATTGGCGATGTGTGGAATCAATATTTTACCATCATCCGTTAGCCAAGGTTGTTATTCACAGCAACACGCTGGAATCGaggatatttgatgtgttgaaagAAGCGGGATACCACATTCAAGTGAAGCCGTACAGCTTGGTGGATTTAGCTGAAGGTACACCCGCCGAAGCGTTCGTGCGAGATGAACTCCCGTACGCCAAAGAAGGGGAGCACTGGTACAGCCACGAAACGGACTTACTCCGCTTGTTAATCCTTTACAAGTTCGGAGGCATTTATACAGACATTGATATGATCGTTGTACGAGAACTGCACGACCTACCACTCAATGTTATAGGATGGGAAAGCGCTTCGAATTTGAATGGTgcctttttaaaatttcaaagagGTCACCCATATTTGCGTGCGTGTATCGCTCATTTCTCGACCAGATACGCCCAAGCCTGGTCTGAAAACGGCCCCTTGTTATTGAGCCGAGTTTGGCGAAAGTGGTCAGCGGCGAACCCCAACAATGATGTCATCACGGTAGGAGCGACCGCGTTCTACATGTTTTTCTATCGCAGTATACAGGAGCAGTGTTTCGAAGAGACATCAGGCCTGACATTTGATGAGAATTGGAGGACTTTACGAGACAGAGCGTTTGCCATTCATCTGTACTCGAAAGTAACTGCTAGTTACGGTAATGATAAAATGATTAAGGACGGCactttatgtaaatatattctAAATACGTTTTGCGTGTTGTGCAATAAAGTTTATTAA

Transcript

BRAKERXEIT00000028983

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14BT6	Alpha-1,4-N-acetylglucosaminyltransferase OS=Mus musculus OX=10090 GN=A4gnt PE=2 SV=1
Q9UNA3	Alpha-1,4-N-acetylglucosaminyltransferase OS=Homo sapiens OX=9606 GN=A4GNT PE=1 SV=1
Q10323	Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17G8.11c PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0011809 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04572 all species →	Gb3_synth	Alpha 1,4-glycosyltransferase conserved region	Family	Interproscan
PF04488 all species →	Gly_transf_sug	Glycosyltransferase sugar-binding region containing DXD motif	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051981 all species →	Family	Glycosyltransferase 32	Interproscan
IPR007652 all species →	Domain	Alpha 1,4-glycosyltransferase domain	Interproscan
IPR007577 all species →	Conserved_site	Glycosyltransferase, DXD sugar-binding motif	Interproscan
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12042 all species →	LACTOSYLCERAMIDE 4-ALPHA-GALACTOSYLTRANSFERASE ALPHA- 1,4-GALACTOSYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006688 all species →	Biological Process	glycosphingolipid biosynthetic process	Interproscan
GO:0016758 all species →	Molecular Function	hexosyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for BRAKERXEIP00000028983.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.