Gene detail

Detailed information of BRAKERXEIP00000029050.1 in Muricea muricata

Genomic Location: :...
NR annotation: XP_028412281.1, trifunctional enzyme subunit alpha, mitochondrial-like isoform X2 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

BRAKERXEIT00000029050

ATGCTTTCACGCGCGTTTCAGTGCAGTTTTCGTCGTTTACGCCATGTTTCATCGTCACGTTTACCGGTTTCCAGAGGATTGGCGGTCAATGATTTTGCCAAATCTATGTCTACCCAAGCTGGGAAAAATGTTAATGTCGAAGTCAAAGATGGGGTAGCAGTTGTAAGAATTGATCAACCTGACTCTAAGGTCAATGTTCTTTCGGAAAGTTTGATGTCAGAATTTGAACAGATATTTAATCGTGTTTTCGAAGACCCGAGCATCAGCAGTGCTGTATTGATCTCAGCAAAGCCAGGTTGCTTTATAGCTGGAGCTGATGTCAACATGTTGAATGCAGCAGGTACAGCAGAAAAGGTTGCTGAAATTTCATCTGTTGGCCAGGAGATGATACAAAAACTCGAGGATTGTCCCAAACCCATTGTAGCAGCTATCATGGGCTCATGTCTTGGTGGTGGACTTGAAGTTGCTCTTGGCTGTCATTACAGAGTTGCTGTGAAAGATAGTAAAACAATGTTAGGTGCACCTGAAGTAATGCTTGGTTTATTACCTGGTGGGGGAGGAACTCAGAGATTACCAAAGCTGGTTGGCTTGCCTGATTCCTTAGACATGATGCTAACTGGCAAGAATATTCGTGCTGACAAAGCGAAGAGAATGGGTCTTGTTGATATGCTTGTTAATCCTTTAGGGCCGGGCCTTGCTGAGCCAGCACCTAATACTTTGCGATACTTGGAGGAAATTTCCATTCAAGTTGCCAAAGATCTAGCTAATAAGAAATTAAAGGTGGACAGATCACGGAAATGGACTTCCATGCCAGGGCTTATGTATAAAATCACGACCGAGACAGGATTTGGACAGAACTACGTCTTTAAGAAAGCTAGAGAGACgGTCATGAAAAAGTCTTTGGGATTGTATCCAGCACCATTAAAGATTCTTGATGTCACTAAAGTTGGAGTTGAAAAGGGTGGTTCTGAAGGGTACCGGGCTGAGGCACAGGGTTTTGGTGAACTGGGCGGATCAAACGAAGCCAAGGCTTTGATGTCATTATTCTTTGGCCAGACGGAGTGCAAGAAAAACAGATTCGGCAAGCCCAAACAAGATACAAAGTCTGTGACTGTTCTTGGAGCGGGTCTCATGGGAGCAGGCATTGCTAATGGTTTTGACAAGACGGATATTGTAATCGAAGCTGTTTTTGAAGACCTTGATATTAAACATAAAGTTGTGAAAGAAATCGAGGAGGTTATTCCCGAAACGTgtgtttttgcttcaaatacaTCTGCTTTGCCTATACACAAGATCGCTGAGGCCAGCAAACGACCTGACAAGGTTGTTGGCATGCATTATTTTTCACCTGTGGAGAAGATGCCTTTACTGGAAATCATAACAACAGATAAGACATCTCAGGAAACGGCAGCAATTGCAGTGGATGTTGGTTTAAAACAAGGAAAAACTGTGATTGTTGTTAAGGATGGTCCAGGTTTTTACACAACAAGAATCCTTGCACCAACTATGGGTGAAGTGTTAGCGTTGTTCCAAGAAGGAGTTACACCCGTTGAATTGGACAAGTTGACAAAGACGTTTGGTTTCCCTGTTGGTTCAGCTACACTTGTCGACGAAGTTGGTATCGATGTCGCAACGCACGTCGCCGAAGATCTTGGCAATGCATTTGGTGACAGGCTTAGAGGAGGTGACGTAGGAGTGTTGAAGACAATGGTCGATGAAGGATTTCTAGGACGAAAATCTGGAAAAGGATTTTATGTCTACCCAGTTGGCAAGGGCAAGAAAACGGTCAACAACGCTGCCTTGGATATCCTCAAGAAATACGCTGTTCCCAAGCGAGGAAGCCACTCGCCGGAAGATATCCAACTGCGTTTAGCTGCTCGCTTTACTAACGAGGCATTGTTGACCTTGCAAGAAGGAATTCTCAACAGCCCAGTTGATGGTGACATTGGTGCAGTATTTGGATTAGGATTTCCGCCATTTTTAGGAGGTCCCTTCAGATTCGTGGATACATACGGCGCTGACAACCTCGTAAAAAAGATGCGACAACTGCAGTCTGAAGTCGGAGAAGCTCAATTTGAACCTTGTCAGTTACTACTCGACTACGCCAAGGATCCCTCGAAGAAATTCCACAAAAGATAA

Transcript

BRAKERXEIT00000029050

Protein

Uniprot

Uniprot term	Description
Q8BMS1	Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus OX=10090 GN=Hadha PE=1 SV=1
Q29554	Trifunctional enzyme subunit alpha, mitochondrial OS=Sus scrofa OX=9823 GN=HADHA PE=2 SV=1
P40939	Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens OX=9606 GN=HADHA PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02737	3HCDH_N	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	Domain	Interproscan
PF00378	ECH_1	Enoyl-CoA hydratase/isomerase	Domain	Interproscan
PF00725	3HCDH	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006176	Domain	3-hydroxyacyl-CoA dehydrogenase, NAD binding	Interproscan
IPR001753	Family	Enoyl-CoA hydratase/isomerase	Interproscan
IPR050136	Family	Fatty acid oxidation complex subunit alpha	Interproscan
IPR029045	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR008927	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR006108	Domain	3-hydroxyacyl-CoA dehydrogenase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43612	TRIFUNCTIONAL ENZYME SUBUNIT ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0070403	Molecular Function	NAD+ binding	Interproscan
GO:0016507	Cellular Component	mitochondrial fatty acid beta-oxidation multienzyme complex	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07515	HADHA; enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase	EC:4.2.1.17 EC:1.1.1.211	Caprolactam degradation	ko00930	deepkoala