Detailed information of BRAKERXEIP00000029928.1 in Muricea muricata

Genomic Location: :...
NR annotation: CAB3996865.1, inhibitor of nuclear factor kappa-B kinase subunit alpha-like, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O95628CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 SV=3
Q8BT14CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 SV=2
Q9QY78Inhibitor of nuclear factor kappa-B kinase subunit beta OS=Rattus norvegicus OX=10116 GN=Ikbkb PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00069PkinaseProtein kinase domainDomainInterproscan
PF18397IKBKB_SDDIQBAL scaffold dimerization domainDomainInterproscan
PF14570zf-RING_4RING/Ubox like zinc-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000719DomainProtein kinase domainInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR034261DomainCNOT4, RNA recognition motifInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR041185DomainIKBKB, scaffold dimerization domainInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR051180FamilyInhibitor of nuclear factor kappa-B kinaseInterproscan
IPR046375Homologous_superfamilyIKBKB, scaffold dimerization domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR003954DomainRNA recognition motif domain, eukaryoteInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22969IKB KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008384Molecular FunctionIkappaB kinase activityInterproscan
GO:0008385Cellular ComponentIkappaB kinase complexInterproscan
GO:0018105Biological Processpeptidyl-serine phosphorylationInterproscan
GO:0033209Biological Processtumor necrosis factor-mediated signaling pathwayInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0051092Biological Processpositive regulation of NF-kappaB transcription factor activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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